RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 NOTCH4Q99466 2003 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 AQP12BA6NM10 295 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 LSM1O15116 133 aaKnown RBP16.78■□□□□ 0.28
PHGDH-211ENST00000641213 PFKLP17858 780 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 PTSQ03393 145 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 EMX2Q04743 252 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 ABRAXAS2Q15018 415 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 MTX3Q5HYI7 312 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 RABL3Q5HYI8 236 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 C6orf52Q5T4I8 152 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 AMIGO2Q86SJ2 522 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 TMEM25Q86YD3 366 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 SPPL2CQ8IUH8 684 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 AQP12AQ8IXF9 295 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 FAM110BQ8TC76 370 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 RHBDF1Q96CC6 855 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 CPEB1Q9BZB8 566 aaKnown RBP16.78■□□□□ 0.28
PHGDH-211ENST00000641213 CD244Q9BZW8 370 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 ZDHHC6Q9H6R6 413 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 ACTR3BQ9P1U1 418 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 ZMYM5Q9UJ78 669 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 PCDHGB4Q9UN71 923 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 PCDHGB5Q9Y5G0 923 aa16.78■□□□□ 0.28
PHGDH-211ENST00000641213 H0YJX3 145 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 TIPRLO75663 272 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 LHCGRP22888 699 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 NSG1P42857 185 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 GDF5P43026 501 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 CCNHP51946 323 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-211ENST00000641213 TIGD2Q4W5G0 525 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 SULT1C3Q6IMI6 304 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 LCN8Q6JVE9 175 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 USP45Q70EL2 814 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 ZFAND4Q86XD8 727 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 CNBD2Q96M20 576 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 MCCC1Q96RQ3 725 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-211ENST00000641213 TRIM15Q9C019 465 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 CCM2LQ9NUG4 571 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-211ENST00000641213 ZDHHC3Q9NYG2 299 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 WWOXQ9NZC7 414 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 SLAMF8Q9P0V8 285 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 CROCCQ5TZA2 2017 aa16.77■□□□□ 0.28
PHGDH-211ENST00000641213 GRM6O15303 877 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 HMOX2P30519 316 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 PRKG2Q13237 762 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 NR6A1Q15406 480 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 NRF1Q16656 503 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 ATP13A5Q4VNC0 1218 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 CARD16Q5EG05 197 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 DPY19L3Q6ZPD9 716 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 RFLNAQ6ZTI6 216 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 KIAA2013Q8IYS2 634 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 CHCHD4Q8N4Q1 142 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 UBTD2Q8WUN7 234 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 OPTCQ9UBM4 332 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 SLCO3A1Q9UIG8 710 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 SLC25A13Q9UJS0 675 aa16.77■□□□□ 0.27
PHGDH-211ENST00000641213 C7orf72A4D263 438 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 ARPC2O15144 300 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 POP4O95707 220 aaKnown RBP16.76■□□□□ 0.27
PHGDH-211ENST00000641213 G6PDP11413 515 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 GRIA2P42262 883 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 CASP2P42575 452 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 GSK3BP49841 420 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 B4GALNT1Q00973 533 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 GK3PQ14409 553 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 CRY1Q16526 586 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 AP5B1Q2VPB7 878 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 TTLL9Q3SXZ7 439 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 PPWD1Q96BP3 646 aaKnown RBP16.76■□□□□ 0.27
PHGDH-211ENST00000641213 TCEAL4Q96EI5 215 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 PAWRQ96IZ0 340 aaKnown RBP16.76■□□□□ 0.27
PHGDH-211ENST00000641213 ZNF597Q96LX8 424 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 ABCG8Q9H221 673 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 ALG2Q9H553 416 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 ACTL8Q9H568 366 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 RDH14Q9HBH5 336 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 KCTD5Q9NXV2 234 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 CCL27Q9Y4X3 112 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 ANGPTL3Q9Y5C1 460 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 SLC4A7Q9Y6M7 1214 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 PDE4DIPQ5VU43 2346 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 DHRS12A0PJE2 317 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 NEDD8-MDP1E9PL57 170 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 UGT2B4P06133 528 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 LIPEQ05469 1076 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 INPP5AQ14642 412 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 RFTN2Q52LD8 501 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-211ENST00000641213 HABP4Q5JVS0 413 aaKnown RBP16.76■□□□□ 0.27
PHGDH-211ENST00000641213 NANOGP8Q6NSW7 305 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 CYP20A1Q6UW02 462 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 ERMP1Q7Z2K6 904 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 GOLM1Q8NBJ4 401 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 ZNF641Q96N77 438 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-211ENST00000641213 TMEM74Q96NL1 305 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 COPS8Q99627 209 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 SLC29A1Q99808 456 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 CIB1Q99828 191 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 CEP44Q9C0F1 390 aa16.76■□□□□ 0.27
PHGDH-211ENST00000641213 NANOGQ9H9S0 305 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms