RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-233ENST00000640039 ANKRD11Q6UB99 2663 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 UBA6A0AVT1 1052 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 IFRD1O00458 451 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 LIN7AO14910 233 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 RAD51CO43502 376 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 TTC4O95801 387 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 MTHFD1P11586 935 aaKnown RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 PGAM1P18669 254 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 OGNP20774 298 aaKnown RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 CD1CP29017 333 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 ARL4CP56559 192 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 DHX9Q08211 1270 aaKnown RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 CALCOCO2Q13137 446 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 RPA4Q13156 261 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 BOP1Q14137 746 aaKnown RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 KRT33BQ14525 404 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 RPE65Q16518 533 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 HIF1AQ16665 826 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 WHAMMP3Q1A5X7 153 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 PHF19Q5T6S3 580 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 NKAIN2Q5VXU1 208 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 PTRHD1Q6GMV3 140 aaKnown RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 HIBCHQ6NVY1 386 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 NEPROQ6NW34 567 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 ZNF572Q7Z3I7 529 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 LRRC6Q86X45 466 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 GABPB2Q8TAK5 448 aaPredicted RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 ATXN7L3BQ96GX2 97 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 NUDT22Q9BRQ3 303 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 TRIM56Q9BRZ2 755 aaKnown RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 CCDC86Q9H6F5 360 aaKnown RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 SLC40A1Q9NP59 571 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 GNPTGQ9UJJ9 305 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 VPS9D1Q9Y2B5 631 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 SNX24Q9Y343 169 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 UTP11Q9Y3A2 253 aaKnown RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 HEBP2Q9Y5Z4 205 aa15.5■□□□□ 0.07
SPIN3-233ENST00000640039 CFAP20Q9Y6A4 193 aaKnown RBP15.5■□□□□ 0.07
SPIN3-233ENST00000640039 ATRXP46100 2492 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 COL27A1Q8IZC6 1860 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 CCDC187A0A096LP49 1063 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 AMD1P17707 334 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 CCKBRP32239 447 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 RPL21P46778 160 aaKnown RBP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 ARCN1P48444 511 aaKnown RBP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 PDX1P52945 283 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 MRPS25P82663 173 aaKnown RBP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 PLOD1Q02809 727 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 TUBB2AQ13885 445 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 BRD3Q15059 726 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 PLCL1Q15111 1095 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 LONRF1Q17RB8 773 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 C3orf38Q5JPI3 329 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 B3GNT8Q7Z7M8 397 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 LILRA3Q8N6C8 439 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 OR4D9Q8NGE8 314 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 GPR150Q8NGU9 434 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 KIF18AQ8NI77 898 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 CALML6Q8TD86 181 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 NCSTNQ92542 709 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 TMEM159Q96B96 161 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 LIN37Q96GY3 246 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 RMDN2Q96LZ7 410 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 FCRL3Q96P31 734 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 PANX3Q96QZ0 392 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 TCF12Q99081 682 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 EBNA1BP2Q99848 306 aaKnown RBP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 ERP44Q9BS26 406 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 TUBB2BQ9BVA1 445 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 TBC1D10AQ9BXI6 508 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 RAB17Q9H0T7 212 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 C20orf96Q9NUD7 363 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 AKAP7Q9P0M2 348 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-233ENST00000640039 COLEC10Q9Y6Z7 277 aa15.49■□□□□ 0.07
SPIN3-233ENST00000640039 DSPP15924 2871 aaKnown RBP15.48■□□□□ 0.07
SPIN3-233ENST00000640039 ZCWPW2A0A1B0GU75 182 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 UBXN7O94888 489 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 ITGB6P18564 788 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 RPS3P23396 243 aaKnown RBP eCLIP15.48■□□□□ 0.07
SPIN3-233ENST00000640039 NDUFS1P28331 727 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 PREPP48147 710 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 EIF3BP55884 814 aaKnown RBP15.48■□□□□ 0.07
SPIN3-233ENST00000640039 GABREP78334 506 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 EIF3IQ13347 325 aaKnown RBP15.48■□□□□ 0.07
SPIN3-233ENST00000640039 SQSTM1Q13501 440 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 GPR18Q14330 331 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 RTP5Q14D33 572 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 TMED2Q15363 201 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 TYSND1Q2T9J0 566 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 ZNF470Q6ECI4 717 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 FOXR1Q6PIV2 292 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 CILP2Q8IUL8 1156 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 AGGF1Q8N302 714 aaeCLIP15.48■□□□□ 0.07
SPIN3-233ENST00000640039 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
SPIN3-233ENST00000640039 WDR36Q8NI36 951 aaKnown RBP15.48■□□□□ 0.07
SPIN3-233ENST00000640039 LRRC39Q96DD0 335 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 INSM2Q96T92 566 aaPredicted RBP15.48■□□□□ 0.07
SPIN3-233ENST00000640039 FAM167BQ9BTA0 163 aa15.48■□□□□ 0.07
SPIN3-233ENST00000640039 CARD6Q9BX69 1037 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms