RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 METTL6Q8TCB7 284 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 GPR152Q8TDT2 470 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 SLC47A1Q96FL8 570 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 MS4A4AQ96JQ5 239 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 NSMCE3Q96MG7 304 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 RDH12Q96NR8 316 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 ZNF382Q96SR6 550 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 TBCDQ9BTW9 1192 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 UGT2B28Q9BY64 529 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 IKZF5Q9H5V7 419 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 SARS2Q9NP81 518 aaKnown RBP10.76□□□□□ -0.69
SNIP1-204ENST00000638725 ADGRE2Q9UHX3 823 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 TRIM17Q9Y577 477 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 SNX5Q9Y5X3 404 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 GRXCR2A6NFK2 248 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 SLC1A7O00341 560 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 HS6ST1O60243 411 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 MGEA5O60502 916 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 NDST3O95803 873 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 SERPINF2P08697 491 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 PCMT1P22061 227 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 EIF2B2P49770 351 aaKnown RBP10.76□□□□□ -0.69
SNIP1-204ENST00000638725 CPT1AP50416 773 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 GABARAPL2P60520 117 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 OCA2Q04671 838 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 RFTN2Q52LD8 501 aaPredicted RBP10.76□□□□□ -0.69
SNIP1-204ENST00000638725 LDLRAD1Q5T700 205 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 AFTPHQ6ULP2 937 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 GLT6D1Q7Z4J2 308 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 NECAB2Q7Z6G3 386 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 TMEM179BQ7Z7N9 219 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 MON1AQ86VX9 555 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 ATP6V0D2Q8N8Y2 350 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 KLHDC9Q8NEP7 349 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 MDGA1Q8NFP4 955 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 PJA1Q8NG27 643 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 FRS2Q8WU20 508 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 BRI3BPQ8WY22 251 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 RMDN1Q96DB5 314 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 TRIB3Q96RU7 358 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 ZBED2Q9BTP6 218 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 MROQ9BYG7 248 aa10.76□□□□□ -0.69
SNIP1-204ENST00000638725 TRMT6Q9UJA5 497 aaKnown RBP10.76□□□□□ -0.69
SNIP1-204ENST00000638725 LSM1O15116 133 aaKnown RBP10.75□□□□□ -0.69
SNIP1-204ENST00000638725 XPNPEP2O43895 674 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 PRAMEF11O60813 436 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 UGT2B11O75310 529 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 VPS26AO75436 327 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 KATNA1O75449 491 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 EPOP01588 193 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 CHRNA1P02708 482 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 PKMP14618 531 aaKnown RBP10.75□□□□□ -0.69
SNIP1-204ENST00000638725 FSHRP23945 695 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 GRK4P32298 578 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 RGRP47804 291 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 IFITM3Q01628 133 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 AP5B1Q2VPB7 878 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 CTSL3PQ5NE16 218 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 PRR23BQ6ZRT6 265 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 SLCO6A1Q86UG4 719 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 ANKRD13BQ86YJ7 626 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 ZNF548Q8NEK5 533 aaPredicted RBP10.75□□□□□ -0.69
SNIP1-204ENST00000638725 CD200R1Q8TD46 325 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 ZFP90Q8TF47 636 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 EXOC2Q96KP1 924 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 B3GALT6Q96L58 329 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 NODALQ96S42 347 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 THUMPD3Q9BV44 507 aaKnown RBP10.75□□□□□ -0.69
SNIP1-204ENST00000638725 ACTR8Q9H981 624 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 AKIP1Q9NQ31 210 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 MTRRQ9UBK8 725 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.75□□□□□ -0.69
SNIP1-204ENST00000638725 LOC100130705A0A1B0GUX0 176 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 IQCF5A8MTL0 148 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 NDUFS2O75306 463 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 JRKO75564 520 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 PRKD3O94806 890 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 ALDH4A1P30038 563 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 HOXC8P31273 242 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 RPS3AP61247 264 aaKnown RBP10.75□□□□□ -0.69
SNIP1-204ENST00000638725 ISL1P61371 349 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 EPS8Q12929 822 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 BTG3Q14201 252 aaPredicted RBP10.75□□□□□ -0.69
SNIP1-204ENST00000638725 PTGR1Q14914 329 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 ABRAXAS2Q15018 415 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 PARP15Q460N3 678 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 OR4F6Q8NGB9 312 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 OR8J3Q8NGG0 315 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 CNIH3Q8TBE1 160 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 SLC35B4Q969S0 331 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 ITPKCQ96DU7 683 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 ITCHQ96J02 903 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 BTN2A3PQ96KV6 586 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 CCDC115Q96NT0 180 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 RBM4BQ9BQ04 359 aaKnown RBP10.75□□□□□ -0.69
SNIP1-204ENST00000638725 KATNAL1Q9BW62 490 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 RBM4Q9BWF3 364 aaKnown RBP10.75□□□□□ -0.69
SNIP1-204ENST00000638725 GORASP2Q9H8Y8 452 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 HMG20AQ9NP66 347 aa10.75□□□□□ -0.69
SNIP1-204ENST00000638725 PCDH12Q9NPG4 1184 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms