RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 SYTL3Q4VX76 610 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 CES4AQ5XG92 561 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 DOK6Q6PKX4 331 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 ZCCHC23Q6ZST2 131 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 FAM47EQ6ZV65 393 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 RAB44Q7Z6P3 723 aaPredicted RBP11.55□□□□□ -0.56
CLN6-223ENST00000637823 ZNF547Q8IVP9 402 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 HM13Q8TCT9 377 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 EDAQ92838 391 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 GLMNQ92990 594 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 L3HYPDHQ96EM0 354 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 CNDP1Q96KN2 507 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 C7orf26Q96N11 449 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 GATA5Q9BWX5 397 aaPredicted RBP11.55□□□□□ -0.56
CLN6-223ENST00000637823 GPR174Q9BXC1 333 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 TPSD1Q9BZJ3 242 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 FAM107BQ9H098 131 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 C6orf106Q9H6K1 298 aaPredicted RBP11.55□□□□□ -0.56
CLN6-223ENST00000637823 RDH14Q9HBH5 336 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 SLCO1B3Q9NPD5 702 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 FZD3Q9NPG1 666 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 OARD1Q9Y530 152 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 PCM1Q15154 2024 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 POM121BA6NF01 834 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 NEMP2A6NFY4 417 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 TMEM202A6NGA9 273 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 SUPT3HB4E1H0 165 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 PRAMEF26H0Y7S4 382 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 GFYI3L273 518 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 NDUFAB1O14561 156 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 GRID2O43424 1007 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 NPHS1O60500 1241 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 KCNJ13O60928 360 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 NDUFS2O75306 463 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 SUPT3HO75486 399 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 FSBPO95073 299 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 TGDSO95455 350 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 MATN4O95460 622 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 IGHV4-34P06331 123 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 CEACAM5P06731 702 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 ENO2P09104 434 aaPredicted RBP11.54□□□□□ -0.56
CLN6-223ENST00000637823 GFAPP14136 432 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 ALDH18A1P54886 795 aaKnown RBP11.54□□□□□ -0.56
CLN6-223ENST00000637823 OCRLQ01968 901 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 RPA4Q13156 261 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 RCN2Q14257 317 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 TGFBIQ15582 683 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 CFAP157Q5JU67 520 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 CDKL4Q5MAI5 379 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 SBSNQ6UWP8 590 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 FRA10AC1Q70Z53 315 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 PIGWQ7Z7B1 504 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 C11orf96Q7Z7L8 435 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 AMZ2Q86W34 360 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 VRK3Q8IV63 474 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 CFAP206Q8IYR0 622 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 SLC22A15Q8IZD6 547 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 FBXO39Q8N4B4 442 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 CCNYL1Q8N7R7 359 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 FAM174AQ8TBP5 190 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 PPP4R1Q8TF05 950 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 ZNF473Q8WTR7 871 aaKnown RBP11.54□□□□□ -0.56
CLN6-223ENST00000637823 RLN3Q8WXF3 142 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 ASB11Q8WXH4 323 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 EXT2Q93063 718 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 PHF21BQ96EK2 531 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 SCARF2Q96GP6 870 aaPredicted RBP11.54□□□□□ -0.56
CLN6-223ENST00000637823 BMFQ96LC9 184 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 ELAC2Q9BQ52 826 aaKnown RBP11.54□□□□□ -0.56
CLN6-223ENST00000637823 TRIM54Q9BYV2 358 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 DRC3Q9H069 523 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 RABEP2Q9H5N1 569 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 NUDT4Q9NZJ9 180 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 NCKIPSDQ9NZQ3 722 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 CD274Q9NZQ7 290 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 ZNHIT2Q9UHR6 403 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 SLC17A4Q9Y2C5 497 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.54□□□□□ -0.56
CLN6-223ENST00000637823 CACNA1IQ9P0X4 2223 aa11.54□□□□□ -0.56
CLN6-223ENST00000637823 COL6A3P12111 3177 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 H3BM21 787 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 STX16-NPEPL1H3BU86 382 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 STX16O14662 325 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 AXIN1O15169 862 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 ITM2AO43736 263 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 SNX2O60749 519 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 HSPA4LO95757 839 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 S100BP04271 92 aaPredicted RBP11.53□□□□□ -0.56
CLN6-223ENST00000637823 KELP23276 732 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 PBLDP30039 288 aaPredicted RBP11.53□□□□□ -0.56
CLN6-223ENST00000637823 HOXA6P31267 233 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 HK3P52790 923 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 CLDN2P57739 230 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 PFN3P60673 137 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 HERVK_113P63132 956 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 CDKL1Q00532 357 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 SP140Q13342 867 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 NFATC4Q14934 902 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 PPP1R3AQ16821 1122 aa11.53□□□□□ -0.56
CLN6-223ENST00000637823 PFKFB4Q16877 469 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms