RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 CCDC85BQ15834 202 aaPredicted RBP21.07■□□□□ 0.96
SPAST-204ENST00000621856 C18orf21Q32NC0 220 aaPredicted RBP21.07■□□□□ 0.96
SPAST-204ENST00000621856 TMEM220Q6QAJ8 160 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 UBE2R2Q712K3 238 aaPredicted RBP21.07■□□□□ 0.96
SPAST-204ENST00000621856 IL17RCQ8NAC3 791 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 ASZ1Q8WWH4 475 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 DLG3Q92796 817 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 DNASE1L2Q92874 299 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 SLC7A6OSQ96CW6 309 aaPredicted RBP21.07■□□□□ 0.96
SPAST-204ENST00000621856 UBE2ZQ9H832 354 aaPredicted RBP21.07■□□□□ 0.96
SPAST-204ENST00000621856 MEAF6Q9HAF1 191 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 RDH14Q9HBH5 336 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 WWOXQ9NZC7 414 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 SERGEFQ9UGK8 458 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 TAGLN3Q9UI15 199 aa21.07■□□□□ 0.96
SPAST-204ENST00000621856 G3BP2Q9UN86 482 aaKnown RBP21.07■□□□□ 0.96
SPAST-204ENST00000621856 PABPN1LA6NDY0 278 aaKnown RBP21.06■□□□□ 0.96
SPAST-204ENST00000621856 IGLON5A6NGN9 336 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 E2F3O00716 465 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 GIPC1O14908 333 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 DCXO43602 365 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 TM7SF2O76062 418 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 C8GP07360 202 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 FGF4P08620 206 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 HOXB2P14652 356 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 AOC1P19801 751 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 PTPN4P29074 926 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 COPAP53621 1224 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 TAS2R38P59533 333 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 KCNJ2P63252 427 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 SULT1C3Q6IMI6 304 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 TRMT11Q7Z4G4 463 aaKnown RBP21.06■□□□□ 0.96
SPAST-204ENST00000621856 NLRP8Q86W28 1048 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 VRK3Q8IV63 474 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 PLCD3Q8N3E9 789 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 KCNV2Q8TDN2 545 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 PPM1EQ8WY54 764 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 CCM2Q9BSQ5 444 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 ZBTB26Q9HCK0 441 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 ARHGEF3Q9NR81 526 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 PTBP2Q9UKA9 531 aaKnown RBP21.06■□□□□ 0.96
SPAST-204ENST00000621856 ASB1Q9Y576 335 aa21.06■□□□□ 0.96
SPAST-204ENST00000621856 PBLDP30039 288 aaPredicted RBP21.05■□□□□ 0.96
SPAST-204ENST00000621856 INHBCP55103 352 aa21.05■□□□□ 0.96
SPAST-204ENST00000621856 GTF2H3Q13889 308 aa21.05■□□□□ 0.96
SPAST-204ENST00000621856 MAELQ96JY0 434 aaKnown RBP21.05■□□□□ 0.96
SPAST-204ENST00000621856 TRIM54Q9BYV2 358 aa21.05■□□□□ 0.96
SPAST-204ENST00000621856 OR2AG1Q9H205 316 aa21.05■□□□□ 0.96
SPAST-204ENST00000621856 FBRSQ9HAH7 460 aa21.05■□□□□ 0.96
SPAST-204ENST00000621856 COLQQ9Y215 455 aaPredicted RBP21.05■□□□□ 0.96
SPAST-204ENST00000621856 SZT2Q5T011 3432 aa21.05■□□□□ 0.96
SPAST-204ENST00000621856 DNTTP04053 509 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 CPA2P48052 419 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 HSPA7P48741 367 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 FAM219BQ5XKK7 198 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 KANK2Q63ZY3 851 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 NEK10Q6ZWH5 1172 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 ADGRG6Q86SQ4 1221 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 CEP70Q8NHQ1 597 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 CATSPER2Q96P56 530 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 FBXL12Q9NXK8 326 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 TAPBPO15533 448 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 ADAM23O75077 832 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 GPC4O75487 556 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 PCCBP05166 539 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 ANXA5P08758 320 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 ENO2P09104 434 aaPredicted RBP21.04■□□□□ 0.96
SPAST-204ENST00000621856 ARL1P40616 181 aaPredicted RBP21.04■□□□□ 0.96
SPAST-204ENST00000621856 FOXA1P55317 472 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 GPRIN3Q6ZVF9 776 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 GOLGA7Q7Z5G4 137 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 SYVN1Q86TM6 617 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 ACTRT2Q8TDY3 377 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 TWIST2Q8WVJ9 160 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 TMEM159Q96B96 161 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 RHBDF1Q96CC6 855 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 C19orf60Q96EN9 201 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 RAB3IPQ96QF0 476 aaPredicted RBP21.04■□□□□ 0.96
SPAST-204ENST00000621856 KCNA7Q96RP8 456 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 MKRN2Q9H000 416 aaKnown RBP21.04■□□□□ 0.96
SPAST-204ENST00000621856 EPHX3Q9H6B9 360 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 TRIM39Q9HCM9 518 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 SLC40A1Q9NP59 571 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.04■□□□□ 0.96
SPAST-204ENST00000621856 ARL15Q9NXU5 204 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 PDE10AQ9Y233 779 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 ANGPTL3Q9Y5C1 460 aa21.04■□□□□ 0.96
SPAST-204ENST00000621856 TMEM202A6NGA9 273 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 SLC16A5O15375 505 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 CCNT2O60583 730 aaKnown RBP21.03■□□□□ 0.96
SPAST-204ENST00000621856 ESRRBO95718 433 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 ASGR2P07307 311 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 HIST1H2AGP0C0S8 130 aaPredicted RBP21.03■□□□□ 0.96
SPAST-204ENST00000621856 HIST1H2ADP20671 130 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 COL9A1P20849 921 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 CYP2A7P20853 494 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 RPIAP49247 311 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 SP140Q13342 867 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 GTF2H2Q13888 395 aa21.03■□□□□ 0.96
SPAST-204ENST00000621856 UGT3A2Q3SY77 523 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms