RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 MAPKAPK3Q16644 382 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PPP1R3AQ16821 1122 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 NADK2Q4G0N4 442 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 RBM20Q5T481 1227 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 IL23RQ5VWK5 629 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 LILRA2Q8N149 483 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 UXS1Q8NBZ7 420 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 ZMIZ2Q8NF64 920 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 FAM110BQ8TC76 370 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 ANKRD49Q8WVL7 239 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 SORCS1Q8WY21 1168 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 ISL2Q96A47 359 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 TP53INP1Q96A56 240 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PPM1MQ96MI6 270 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 OR2AG1Q9H205 316 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 KLHL1Q9NR64 748 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 TBC1D14Q9P2M4 693 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 ACACAQ13085 2346 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PTGESO14684 152 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 CNPP09543 421 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 SBK3P0C264 359 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 KCNE1P15382 129 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PSMC3P17980 439 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 CXCR2P25025 360 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PSMB9P28065 219 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 CSKP41240 450 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC10A7Q0GE19 358 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 PITRM1Q5JRX3 1037 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 LY6G5CQ5SRR4 150 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 LDLRAD1Q5T700 205 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 LSMEM2Q8N112 164 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 STK40Q8N2I9 435 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 DPP10Q8N608 796 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 SMG8Q8ND04 991 aaKnown RBP8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 OR13C4Q8NGS5 318 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 JSRP1Q96MG2 331 aaPredicted RBP8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 BRINP2Q9C0B6 783 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC39A8Q9C0K1 460 aa8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.17□□□□□ -1.1
PTPDC1-204ENST00000620992 CEP350Q5VT06 3117 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 DIDO1Q9BTC0 2240 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 LRRC14BA6NHZ5 514 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 E7ENX8 843 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 CD72P21854 359 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 ATP5F1P24539 256 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 BUD31P41223 144 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 RANBP1P43487 201 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 GRB14Q14449 540 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 TEAD2Q15562 447 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 ARSIQ5FYB1 569 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 DGKKQ5KSL6 1271 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 BRMS1LQ5PSV4 323 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 UBXN11Q5T124 520 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 C9orf64Q5T6V5 341 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 TMEM220Q6QAJ8 160 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 ARHGAP22Q7Z5H3 698 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 OR9I1Q8NGQ6 314 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 TADA1Q96BN2 335 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 DGCR14Q96DF8 476 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 SIPA1Q96FS4 1042 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 PANX1Q96RD7 426 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 GAL3ST4Q96RP7 486 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC39A3Q9BRY0 314 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 KIFC1Q9BW19 673 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 C1QTNF1Q9BXJ1 281 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 NLNQ9BYT8 704 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 ALG2Q9H553 416 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 MAT2BQ9NZL9 334 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 GNPTGQ9UJJ9 305 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 AP4S1Q9Y587 144 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 TRIM38O00635 465 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 TLX1P31314 330 aaPredicted RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 GRIA3P42263 894 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 PRKAA2P54646 552 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 AIF1P55008 147 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 FBXL22Q6P050 247 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 PIWIL4Q7Z3Z4 852 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 R3HCC1LQ7Z5L2 792 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 CDK20Q8IZL9 346 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 KDM1BQ8NB78 822 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 ADCY4Q8NFM4 1077 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 LRTOMTQ8WZ04 291 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 SMPDL3BQ92485 455 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC9A6Q92581 669 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 MTERF1Q99551 399 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 MRPL57Q9BQC6 102 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 GPR62Q9BZJ7 368 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 PAPPA2Q9BXP8 1791 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 CARNS1A5YM72 827 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 ZNF839A8K0R7 811 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 J3KR12 359 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 RGS14O43566 566 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 PAX3P23760 479 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 ARCN1P48444 511 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 RPS6KA3P51812 740 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 COPZ1P61923 177 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 CDKL1Q00532 357 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 CSTF3Q12996 717 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 SEMA3BQ13214 749 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 NEDD8Q15843 81 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms