RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 KCTD4Q8WVF5 259 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 OR1E3Q8WZA6 343 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ELMO1Q92556 727 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 APOPT1Q96IL0 206 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ZC3H10Q96K80 434 aaKnown RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 TSNARE1Q96NA8 513 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 COL25A1Q9BXS0 654 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 DERL2Q9GZP9 239 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 MIR1-1HGQ9H1L0 117 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 TFB2MQ9H5Q4 396 aaKnown RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 CYP4F12Q9HCS2 524 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 FGF22Q9HCT0 170 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 TM9SF3Q9HD45 589 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 MRPL40Q9NQ50 206 aaKnown RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 ZNF358Q9NW07 568 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 TMEM216Q9P0N5 145 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 GULP1Q9UBP9 304 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 SLC23A2Q9UGH3 650 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 MOSPD1Q9UJG1 213 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 SUFUQ9UMX1 484 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 PRKAB1Q9Y478 270 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 PCYT1BQ9Y5K3 369 aaPredicted RBP7.88□□□□□ -1.15
CPNE3-209ENST00000620393 SLCO1B1Q9Y6L6 691 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 DGKBQ9Y6T7 804 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 TRPM6Q9BX84 2022 aa7.88□□□□□ -1.15
CPNE3-209ENST00000620393 CACNA1IQ9P0X4 2223 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 CCDC189A1A4V9 331 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 PRSS38A1L453 326 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 FAM86C2PA6NEL3 165 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 PRR33A8MZF0 331 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 PRR5-ARHGAP8B1AHC4 643 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 VILLO15195 856 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 TM9SF1O15321 606 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 BCAT2O15382 392 aaPredicted RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 ZWINTO95229 277 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 TOP3BO95985 862 aaKnown RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 TNFP01375 233 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 RBP1P09455 135 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 MPC1LP0DKB6 136 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 NR1D1P20393 614 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 ITPKAP23677 461 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 KCNC1P48547 511 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 DHPSP49366 369 aaPredicted RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 CLCNKAP51800 687 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 DMPKQ09013 629 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 EIF2B5Q13144 721 aaKnown RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 RPA4Q13156 261 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 FZD2Q14332 565 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 SEPT7Q16181 437 aaKnown RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 ALG11Q2TAA5 492 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 CCDC153Q494R4 210 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 N4BP2L1Q5TBK1 243 aaPredicted RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 LYSMD4Q5XG99 296 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 METRNLQ641Q3 311 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 LRRC8EQ6NSJ5 796 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 KLC3Q6P597 504 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 CEP68Q76N32 757 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 SLC22A18ASQ8N1D0 253 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 FSTL5Q8N475 847 aaPredicted RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 TMEM151AQ8N4L1 468 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 OXR1Q8N573 874 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 FAM76AQ8TAV0 307 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 STAG3L4Q8TBR4 150 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 MDM1Q8TC05 714 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 HM13Q8TCT9 377 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 TSACCQ96A04 125 aaPredicted RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 KIAA1191Q96A73 305 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 TMEM159Q96B96 161 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 SKA1Q96BD8 255 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 LINGO1Q96FE5 620 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 MRPL57Q9BQC6 102 aaKnown RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 SELENOSQ9BQE4 189 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 TIMM29Q9BSF4 260 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 IQCGQ9H095 443 aaKnown RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 C12orf65Q9H3J6 166 aaKnown RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 DPEP2Q9H4A9 486 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 CNOT10Q9H9A5 744 aaKnown RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 COG4Q9H9E3 785 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 CARS2Q9HA77 564 aaKnown RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 TM7SF3Q9NS93 570 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 TRNAU1APQ9NX07 287 aaKnown RBP7.87□□□□□ -1.15
CPNE3-209ENST00000620393 NKIRAS1Q9NYS0 192 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 OGFRQ9NZT2 677 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 KLQ9UEF7 1012 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 EMCNQ9ULC0 261 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 ACSL5Q9ULC5 683 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 CDYLQ9Y232 598 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 GPSM3Q9Y4H4 160 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 PCDHGA2Q9Y5H1 932 aa7.87□□□□□ -1.15
CPNE3-209ENST00000620393 MYLKQ15746 1914 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 A0A1B0GTW7 788 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 PRR19A6NJB7 356 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 TARM1B6A8C7 271 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 GFYI3L273 518 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 ZBTB14O43829 449 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 PLIN3O60664 434 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 RASGRP1O95267 797 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 PROCP04070 461 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 DHRS4L1P0CG22 281 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 GNSP15586 552 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms