RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 DKK4Q9UBT3 224 aa18.45■□□□□ 0.54
SUSD3-205ENST00000617293 RPS6KL1Q9Y6S9 549 aa18.45■□□□□ 0.54
SUSD3-205ENST00000617293 IGHV5-10-1A0A0J9YXX1 117 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 PMS2P1A4D2B8 440 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 F8W8V4 182 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 TAF4O00268 1085 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 NDUFS3O75489 264 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 UBXN7O94888 489 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 GSTM1P09488 218 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 MTHFD1P11586 935 aaKnown RBP18.44■□□□□ 0.54
SUSD3-205ENST00000617293 ITGB6P18564 788 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 PDHA2P29803 388 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 MAGEA3P43357 314 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 LIMK2P53671 638 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 MRPS25P82663 173 aaKnown RBP18.44■□□□□ 0.54
SUSD3-205ENST00000617293 GSTM4Q03013 218 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 C2orf54Q08AI8 447 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 EIF3IQ13347 325 aaKnown RBP18.44■□□□□ 0.54
SUSD3-205ENST00000617293 KRT33BQ14525 404 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 SNAP47Q5SQN1 464 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 KIAA0930Q6ICG6 404 aaPredicted RBP18.44■□□□□ 0.54
SUSD3-205ENST00000617293 CAPRIN2Q6IMN6 1127 aaKnown RBP18.44■□□□□ 0.54
SUSD3-205ENST00000617293 MRNIPQ6NTE8 343 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 DUS1LQ6P1R4 473 aaKnown RBP18.44■□□□□ 0.54
SUSD3-205ENST00000617293 NAPRTQ6XQN6 538 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 SDCCAG8Q86SQ7 713 aaPredicted RBP18.44■□□□□ 0.54
SUSD3-205ENST00000617293 LSMEM2Q8N112 164 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 AGGF1Q8N302 714 aaeCLIP18.44■□□□□ 0.54
SUSD3-205ENST00000617293 RCBTB1Q8NDN9 531 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 TRIM44Q96DX7 344 aaPredicted RBP18.44■□□□□ 0.54
SUSD3-205ENST00000617293 CCDC74BQ96LY2 380 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 RMDN2Q96LZ7 410 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 EPB41L1Q9H4G0 881 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 IL1RAPL1Q9NZN1 696 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 FREM2Q5SZK8 3169 aa18.44■□□□□ 0.54
SUSD3-205ENST00000617293 EFCAB8A8MWE9 144 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 PRMT5O14744 637 aaPredicted RBP18.43■□□□□ 0.54
SUSD3-205ENST00000617293 PLD2O14939 933 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 HGFP14210 728 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 RBMS1P29558 406 aaKnown RBP18.43■□□□□ 0.54
SUSD3-205ENST00000617293 PREPP48147 710 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 ARCN1P48444 511 aaKnown RBP18.43■□□□□ 0.54
SUSD3-205ENST00000617293 DHX9Q08211 1270 aaKnown RBP18.43■□□□□ 0.54
SUSD3-205ENST00000617293 MORF4L2Q15014 288 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 ZNF658BQ4V348 819 aaPredicted RBP18.43■□□□□ 0.54
SUSD3-205ENST00000617293 WDR74Q6RFH5 385 aaPredicted RBP18.43■□□□□ 0.54
SUSD3-205ENST00000617293 TMEM135Q86UB9 458 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 PROSER1Q86XN7 944 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 JPH3Q8WXH2 748 aaPredicted RBP18.43■□□□□ 0.54
SUSD3-205ENST00000617293 STAMBPL1Q96FJ0 436 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 CMKLR1Q99788 373 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.43■□□□□ 0.54
SUSD3-205ENST00000617293 AKAP7Q9P0M2 348 aaPredicted RBP18.43■□□□□ 0.54
SUSD3-205ENST00000617293 KLHL3Q9UH77 587 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 LOXL2Q9Y4K0 774 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 PCDHGA8Q9Y5G5 932 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 COLEC10Q9Y6Z7 277 aa18.43■□□□□ 0.54
SUSD3-205ENST00000617293 UBA6A0AVT1 1052 aaPredicted RBP18.42■□□□□ 0.54
SUSD3-205ENST00000617293 IQCF5A8MTL0 148 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 A8MU76 341 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 IFRD1O00458 451 aaPredicted RBP18.42■□□□□ 0.54
SUSD3-205ENST00000617293 LIN7AO14910 233 aaPredicted RBP18.42■□□□□ 0.54
SUSD3-205ENST00000617293 BANF1O75531 89 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 USP1O94782 785 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 TNFSF15O95150 251 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 JMJD7P0C870 316 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 ITGA8P53708 1063 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 RPA4Q13156 261 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 BOP1Q14137 746 aaKnown RBP18.42■□□□□ 0.54
SUSD3-205ENST00000617293 C16orf72Q14CZ0 275 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 PLCL1Q15111 1095 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 BBS9Q3SYG4 887 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 PTRHD1Q6GMV3 140 aaKnown RBP18.42■□□□□ 0.54
SUSD3-205ENST00000617293 NEPROQ6NW34 567 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 ZNF592Q92610 1267 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 SNF8Q96H20 258 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 PRR11Q96HE9 360 aaPredicted RBP18.42■□□□□ 0.54
SUSD3-205ENST00000617293 SLC46A1Q96NT5 459 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 FERD3LQ96RJ6 166 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 TSSK1BQ9BXA7 367 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 OR52A5Q9H2C5 316 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 OGFRQ9NZT2 677 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 SNX24Q9Y343 169 aa18.42■□□□□ 0.54
SUSD3-205ENST00000617293 MAP1BP46821 2468 aaKnown RBP18.41■□□□□ 0.54
SUSD3-205ENST00000617293 ZCWPW2A0A1B0GU75 182 aa18.41■□□□□ 0.54
SUSD3-205ENST00000617293 PFDN6O15212 129 aa18.41■□□□□ 0.54
SUSD3-205ENST00000617293 URI1O94763 535 aaPredicted RBP18.41■□□□□ 0.54
SUSD3-205ENST00000617293 THRAP10827 490 aa18.41■□□□□ 0.54
SUSD3-205ENST00000617293 ITIH1P19827 911 aa18.41■□□□□ 0.54
SUSD3-205ENST00000617293 CSE1LP55060 971 aaKnown RBP18.41■□□□□ 0.54
SUSD3-205ENST00000617293 EIF3BP55884 814 aaKnown RBP18.41■□□□□ 0.54
SUSD3-205ENST00000617293 TRA2AQ13595 282 aaKnown RBP eCLIP18.41■□□□□ 0.54
SUSD3-205ENST00000617293 THOC5Q13769 683 aaKnown RBP18.41■□□□□ 0.54
SUSD3-205ENST00000617293 MSS51Q4VC12 460 aa18.41■□□□□ 0.54
SUSD3-205ENST00000617293 SYTL3Q4VX76 610 aa18.41■□□□□ 0.54
SUSD3-205ENST00000617293 DNAJC21Q5F1R6 531 aaKnown RBP18.41■□□□□ 0.54
SUSD3-205ENST00000617293 HIBCHQ6NVY1 386 aaPredicted RBP18.41■□□□□ 0.54
SUSD3-205ENST00000617293 MAATS1Q7Z4T9 603 aa18.41■□□□□ 0.54
SUSD3-205ENST00000617293 PLXDC1Q8IUK5 500 aa18.41■□□□□ 0.54
SUSD3-205ENST00000617293 KRT222Q8N1A0 295 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms