RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 FGF21Q9NSA1 209 aa17.35■□□□□ 0.37
SSBP1-215ENST00000612337 PCDHA13Q9Y5I0 950 aa17.35■□□□□ 0.37
SSBP1-215ENST00000612337 RFPL1O75677 317 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 NTRK1P04629 796 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 TUBB4BP68371 445 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 HSD11B2P80365 405 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 TUBB2AQ13885 445 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 CCDC181Q5TID7 509 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 DUS1LQ6P1R4 473 aaKnown RBP17.34■□□□□ 0.37
SSBP1-215ENST00000612337 CERS6Q6ZMG9 384 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 DAAM2Q86T65 1068 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 CCDC170Q8IYT3 715 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 CARFQ8N187 725 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 SEC14L1Q92503 715 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 TUBB2BQ9BVA1 445 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 GPR87Q9BY21 358 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 ACTL8Q9H568 366 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 KIR3DX1Q9H7L2 352 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 LUC7LQ9NQ29 371 aaKnown RBP17.34■□□□□ 0.37
SSBP1-215ENST00000612337 SLC24A2Q9UI40 661 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 FKBPLQ9UIM3 349 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 TFR2Q9UP52 801 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 EFR3BQ9Y2G0 817 aa17.34■□□□□ 0.37
SSBP1-215ENST00000612337 AAR2Q9Y312 384 aaKnown RBP17.34■□□□□ 0.37
SSBP1-215ENST00000612337 AGAP14A8MT82 685 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 SGTAO43765 313 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 ZBTB11O95625 1053 aaPredicted RBP17.33■□□□□ 0.36
SSBP1-215ENST00000612337 SLC35G4P0C7Q5 338 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 NR1D1P20393 614 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 CTNNA1P35221 906 aaKnown RBP17.33■□□□□ 0.36
SSBP1-215ENST00000612337 XIAPP98170 497 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 PDE1BQ01064 536 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 OTUD4Q01804 1114 aaKnown RBP17.33■□□□□ 0.36
SSBP1-215ENST00000612337 SPA17Q15506 151 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 ANKRD20A2Q5SQ80 823 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 ANKRD20A1Q5TYW2 823 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 ANKRD20A3Q5VUR7 823 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 CDKL3Q8IVW4 592 aaPredicted RBP17.33■□□□□ 0.36
SSBP1-215ENST00000612337 APLFQ8IW19 511 aaPredicted RBP17.33■□□□□ 0.36
SSBP1-215ENST00000612337 SPDYE1Q8NFV5 336 aaPredicted RBP17.33■□□□□ 0.36
SSBP1-215ENST00000612337 OR8K5Q8NH50 307 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 ACTL9Q8TC94 416 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 NAT14Q8WUY8 206 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 RMDN2Q96LZ7 410 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 C19orf43Q9BQ61 176 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 APOL2Q9BQE5 337 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 AKIRIN1Q9H9L7 192 aaPredicted RBP17.33■□□□□ 0.36
SSBP1-215ENST00000612337 TLK1Q9UKI8 766 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 MAN2B2Q9Y2E5 1009 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 PCDHA3Q9Y5H8 950 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 COLEC10Q9Y6Z7 277 aa17.33■□□□□ 0.36
SSBP1-215ENST00000612337 PRRC2CQ9Y520 2896 aaKnown RBP17.33■□□□□ 0.36
SSBP1-215ENST00000612337 NBPF19A0A087WUL8 3843 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 USP9XQ93008 2570 aaPredicted RBP17.32■□□□□ 0.36
SSBP1-215ENST00000612337 OR6C74A6NCV1 312 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 K7EM74 188 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 CPNE3O75131 537 aaKnown RBP17.32■□□□□ 0.36
SSBP1-215ENST00000612337 CRTAMO95727 393 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 RALBP11234 206 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 PSMB4P28070 264 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 NDUFS1P28331 727 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 PTPN4P29074 926 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 PTPN7P35236 360 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 PRLHRP49683 370 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 MSLNQ13421 630 aaPredicted RBP17.32■□□□□ 0.36
SSBP1-215ENST00000612337 OLIG2Q13516 323 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 UBAP2LQ14157 1087 aaKnown RBP17.32■□□□□ 0.36
SSBP1-215ENST00000612337 PRPSAP1Q14558 356 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 CAPRIN2Q6IMN6 1127 aaKnown RBP17.32■□□□□ 0.36
SSBP1-215ENST00000612337 ARMC6Q6NXE6 501 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 FAM199XQ6PEV8 388 aaPredicted RBP17.32■□□□□ 0.36
SSBP1-215ENST00000612337 SARM1Q6SZW1 724 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 HM13Q8TCT9 377 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 ULK4Q96C45 1275 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 DCUN1D1Q96GG9 259 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 CALR3Q96L12 384 aaKnown RBP17.32■□□□□ 0.36
SSBP1-215ENST00000612337 RUFY1Q96T51 708 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 CCM2Q9BSQ5 444 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 FAM8A1Q9UBU6 413 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 CRLS1Q9UJA2 301 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 BTRCQ9Y297 605 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 HEBP2Q9Y5Z4 205 aa17.32■□□□□ 0.36
SSBP1-215ENST00000612337 RP1L1Q8IWN7 2480 aaPredicted RBP17.32■□□□□ 0.36
SSBP1-215ENST00000612337 USP9YO00507 2555 aaPredicted RBP17.31■□□□□ 0.36
SSBP1-215ENST00000612337 MACROD2A1Z1Q3 448 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 PJA2O43164 708 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 SCRG1O75711 98 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 STK10O94804 968 aaKnown RBP17.31■□□□□ 0.36
SSBP1-215ENST00000612337 POLBP06746 335 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 RBP3P10745 1247 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 CYLC1P35663 651 aaPredicted RBP17.31■□□□□ 0.36
SSBP1-215ENST00000612337 KPNA2P52292 529 aaKnown RBP17.31■□□□□ 0.36
SSBP1-215ENST00000612337 ZNF140P52738 457 aaPredicted RBP17.31■□□□□ 0.36
SSBP1-215ENST00000612337 RPS15P62841 145 aaKnown RBP17.31■□□□□ 0.36
SSBP1-215ENST00000612337 SRSF1Q07955 248 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSBP1-215ENST00000612337 SEMA5AQ13591 1074 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 GSE1Q14687 1217 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 UGT8Q16880 541 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 TMTC4Q5T4D3 741 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 ASB18Q6ZVZ8 466 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms