RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 RBM41Q96IZ5 413 aaKnown RBP12.84□□□□□ -0.35
RPS28-204ENST00000602140 APOL2Q9BQE5 337 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 GORASP1Q9BQQ3 440 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 GPR87Q9BY21 358 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 ANKMY1Q9P2S6 941 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 SLC24A2Q9UI40 661 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 FKBPLQ9UIM3 349 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 ACSL5Q9ULC5 683 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 C5orf60A6NFR6 353 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 APOC4-APOC2K7ER74 178 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 DNAJB5O75953 348 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 ZBTB11O95625 1053 aaPredicted RBP12.83□□□□□ -0.36
RPS28-204ENST00000602140 APOC2P02655 101 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 POLBP06746 335 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 SLC35G4P0C7Q5 338 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 PTPN4P29074 926 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 ARCN1P48444 511 aaKnown RBP12.83□□□□□ -0.36
RPS28-204ENST00000602140 MLLT10P55197 1068 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 TUBB4BP68371 445 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 PDE1BQ01064 536 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 OLIG2Q13516 323 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 TUBB2AQ13885 445 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 GSE1Q14687 1217 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 GPR19Q15760 415 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 BCL7AQ4VC05 210 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 CCDC181Q5TID7 509 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 ITPRIPL1Q6GPH6 555 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 FBXO38Q6PIJ6 1188 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 RANBP10Q6VN20 620 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 DAAM2Q86T65 1068 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 TMEM126BQ8IUX1 230 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 APLFQ8IW19 511 aaPredicted RBP12.83□□□□□ -0.36
RPS28-204ENST00000602140 LILRA3Q8N6C8 439 aaPredicted RBP12.83□□□□□ -0.36
RPS28-204ENST00000602140 ZFPM2Q8WW38 1151 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 SEC14L1Q92503 715 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 MIB2Q96AX9 1013 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 PPM1MQ96MI6 270 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 TUBB2BQ9BVA1 445 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 TRIM55Q9BYV6 548 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 TSPY26PQ9H489 355 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 KIR3DX1Q9H7L2 352 aa12.83□□□□□ -0.36
RPS28-204ENST00000602140 SPENQ96T58 3664 aaKnown RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 NAV2Q8IVL1 2488 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 KLHL33A6NCF5 533 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 SGTAO43765 313 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 CPNE3O75131 537 aaKnown RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 SCRG1O75711 98 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 PDGFAP04085 211 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 POLR2CP19387 275 aaPredicted RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 PSMB4P28070 264 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 ADRA1AP35348 466 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 KPNA2P52292 529 aaKnown RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 RPS15P62841 145 aaKnown RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 XIAPP98170 497 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 OTUD4Q01804 1114 aaKnown RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 SEMA5AQ13591 1074 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 KRT33BQ14525 404 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 UGT8Q16880 541 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 SKOR2Q2VWA4 1001 aaPredicted RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 TMTC4Q5T4D3 741 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 CAPRIN2Q6IMN6 1127 aaKnown RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 C11orf63Q6NUN7 778 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 CFAP206Q8IYR0 622 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 TC2NQ8N9U0 490 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 OR4E2Q8NGC2 313 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 OR13C4Q8NGS5 318 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 ACTL9Q8TC94 416 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 MR1Q95460 341 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 ZNF501Q96CX3 271 aaPredicted RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 DCUN1D1Q96GG9 259 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 LINC00615Q96LM1 132 aaPredicted RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 RMDN2Q96LZ7 410 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 FERMT1Q9BQL6 677 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 KCND1Q9NSA2 647 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 SOHLH2Q9NX45 425 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 CRLS1Q9UJA2 301 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 FARSAQ9Y285 508 aaKnown RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 AAR2Q9Y312 384 aaKnown RBP12.82□□□□□ -0.36
RPS28-204ENST00000602140 PCDHA13Q9Y5I0 950 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 COLEC10Q9Y6Z7 277 aa12.82□□□□□ -0.36
RPS28-204ENST00000602140 MACROD2A1Z1Q3 448 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 CLEC18AA5D8T8 446 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 AGAP14A8MT82 685 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 DDX3YO15523 660 aaKnown RBP12.81□□□□□ -0.36
RPS28-204ENST00000602140 LCA5LO95447 670 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 CRTAMO95727 393 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 PYGMP11217 842 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 RALBP11234 206 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 CTNNA2P26232 953 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 NDUFS1P28331 727 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 PRLHRP49683 370 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 COPS2P61201 443 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 TMPRSS15P98073 1019 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 PRKAA1Q13131 559 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 GPS2Q13227 327 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 IL10RAQ13651 578 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 LAMB3Q13751 1172 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 PRPSAP1Q14558 356 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 SPA17Q15506 151 aa12.81□□□□□ -0.36
RPS28-204ENST00000602140 ANKRD20A2Q5SQ80 823 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms