RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 RNASEH2BQ5TBB1 312 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 SP5Q6BEB4 398 aaPredicted RBP13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 ARHGAP22Q7Z5H3 698 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 NAT8LQ8N9F0 302 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 PTCD2Q8WV60 388 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 CPT1BQ92523 772 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 NCSTNQ92542 709 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 SNF8Q96H20 258 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 LURAP1Q96LR2 239 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 ACTL8Q9H568 366 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 EIF2B3Q9NR50 452 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 WHRNQ9P202 907 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 FAM153AQ9UHL3 310 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 LNPEPQ9UIQ6 1025 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 AAR2Q9Y312 384 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 SNX24Q9Y343 169 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 PCDHGA9Q9Y5G4 932 aaKnown RBP13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 ST14Q9Y5Y6 855 aa13.68□□□□□ -0.22
SHKBP1-218ENST00000598907 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 DPM1O60762 260 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 KIAA0754O94854 1291 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 SUN1O94901 812 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 AP2A1O95782 977 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 RHOXF2BP0C7M4 288 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 TPSB2P20231 275 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 NFKBIAP25963 317 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 ADRA1AP35348 466 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 ACTR1BP42025 376 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 CD86P42081 329 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 GEMP55040 296 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 ACTR1AP61163 376 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 RPS18P62269 152 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 CTBSQ01459 385 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 GUCY2DQ02846 1103 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 MPP3Q13368 585 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 PRPSAP1Q14558 356 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 TRADDQ15628 312 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 TPSAB1Q15661 275 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 CHRNA6Q15825 494 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 UGP2Q16851 508 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 IZUMO3Q5VZ72 239 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 CCDC70Q6NSX1 233 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 HIBCHQ6NVY1 386 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 PCGF5Q86SE9 256 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 RASGRP3Q8IV61 690 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 CT55Q8WUE5 264 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 SPOCK2Q92563 424 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 SNRNP40Q96DI7 357 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 MRGPRX2Q96LB1 330 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 TUBGCP5Q96RT8 1024 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 RANBP9Q96S59 729 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 RHOXF2Q9BQY4 288 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 ANKZF1Q9H8Y5 726 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 PDP2Q9P2J9 529 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 SUFUQ9UMX1 484 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 ZNF451Q9Y4E5 1061 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 TTLL3Q9Y4R7 772 aa13.67□□□□□ -0.22
SHKBP1-218ENST00000598907 LOC285095A0A1B0GVY8 99 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 TCRBV7S3A2A0A539 114 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 F5H423 210 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 SMAPO00193 183 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 TRAFD1O14545 582 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 HTRA2O43464 458 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 FZD6O60353 706 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 PRLP01236 227 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 EPOP01588 193 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 FUCA1P04066 466 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 MYCLP1P12525 358 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 VARSP26640 1264 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 SUOXP51687 545 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 BASP1P80723 227 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 CDK16Q00536 496 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 CBLBQ13191 982 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 NFATC2Q13469 925 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 GRM3Q14832 879 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 AGERQ15109 404 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 ERCC6LQ2NKX8 1250 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 ANKRD22Q5VYY1 191 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 DOK6Q6PKX4 331 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 ZDHHC24Q6UX98 284 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 RANBP10Q6VN20 620 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 LYSMD3Q7Z3D4 306 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 HOOK3Q86VS8 718 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 ZSWIM9Q86XI8 627 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 PPIL6Q8IXY8 311 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 TAB3Q8N5C8 712 aaPredicted RBP13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 CISD2Q8N5K1 135 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 BBOF1Q8ND07 529 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 MCUQ8NE86 351 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 SLC37A2Q8TED4 501 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 UBXN4Q92575 508 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 PNPLA2Q96AD5 504 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 ECHDC3Q96DC8 303 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 TRIB3Q96RU7 358 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 TDRD1Q9BXT4 1180 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 TRIM31Q9BZY9 425 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 ING2Q9H160 280 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 DPH5Q9H2P9 285 aa13.66□□□□□ -0.22
SHKBP1-218ENST00000598907 RUBCNLQ9H714 662 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms