RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 AKIRIN1Q9H9L7 192 aaPredicted RBP23.34■■□□□ 1.33
LSM4-202ENST00000593564 SLC24A2Q9UI40 661 aa23.34■■□□□ 1.33
LSM4-202ENST00000593564 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.34■■□□□ 1.33
LSM4-202ENST00000593564 C2orf81A6NN90 581 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 APOC4-APOC2K7ER74 178 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 CPNE3O75131 537 aaKnown RBP23.33■■□□□ 1.33
LSM4-202ENST00000593564 ANXA9O76027 345 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 ZBTB11O95625 1053 aaPredicted RBP23.33■■□□□ 1.33
LSM4-202ENST00000593564 APOC2P02655 101 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 SLC35G4P0C7Q5 338 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 PYGMP11217 842 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 PTPN4P29074 926 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 MAGEA1P43355 309 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 UGT8Q16880 541 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 FAM199XQ6PEV8 388 aaPredicted RBP23.33■■□□□ 1.33
LSM4-202ENST00000593564 SPDYE1Q8NFV5 336 aaPredicted RBP23.33■■□□□ 1.33
LSM4-202ENST00000593564 OR4K2Q8NGD2 314 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 OR8K5Q8NH50 307 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 THAP4Q8WY91 577 aa23.33■■□□□ 1.33
LSM4-202ENST00000593564 LINC00615Q96LM1 132 aaPredicted RBP23.33■■□□□ 1.33
LSM4-202ENST00000593564 C5orf60A6NFR6 353 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 SRP72O76094 671 aaKnown RBP23.32■■□□□ 1.32
LSM4-202ENST00000593564 RBL1P28749 1068 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 RPS15P62841 145 aaKnown RBP23.32■■□□□ 1.32
LSM4-202ENST00000593564 PDE1BQ01064 536 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 TBX2Q13207 712 aaPredicted RBP23.32■■□□□ 1.32
LSM4-202ENST00000593564 LAMB3Q13751 1172 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 ITPRIPL1Q6GPH6 555 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 C11orf63Q6NUN7 778 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 ARMC6Q6NXE6 501 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 RANBP10Q6VN20 620 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 SYVN1Q86TM6 617 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 HEMGNQ9BXL5 484 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 ASB8Q9H765 288 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 KCND1Q9NSA2 647 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 FKBPLQ9UIM3 349 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 BTRCQ9Y297 605 aa23.32■■□□□ 1.32
LSM4-202ENST00000593564 USP9YO00507 2555 aaPredicted RBP23.32■■□□□ 1.32
LSM4-202ENST00000593564 USP9XQ93008 2570 aaPredicted RBP23.32■■□□□ 1.32
LSM4-202ENST00000593564 OR6C74A6NCV1 312 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 H7C0C1 242 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 SGTAO43765 313 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 SCRG1O75711 98 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 DNAJB5O75953 348 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 NDUFS1P28331 727 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 ADRA1AP35348 466 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 ATP5OP48047 213 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 GPR19Q15760 415 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 TMTC4Q5T4D3 741 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 ZNF517Q6ZMY9 492 aaPredicted RBP23.31■■□□□ 1.32
LSM4-202ENST00000593564 ATCAYQ86WG3 371 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 FAM26EQ8N5C1 309 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 KRT35Q92764 455 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 ZNF501Q96CX3 271 aaPredicted RBP23.31■■□□□ 1.32
LSM4-202ENST00000593564 RMDN2Q96LZ7 410 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 TRIM55Q9BYV6 548 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 C10orf88Q9H8K7 445 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 LATS2Q9NRM7 1088 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 COLEC10Q9Y6Z7 277 aa23.31■■□□□ 1.32
LSM4-202ENST00000593564 AGAP14A8MT82 685 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 LCA5LO95447 670 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 PDGFAP04085 211 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 KPNA2P52292 529 aaKnown RBP23.3■■□□□ 1.32
LSM4-202ENST00000593564 MLLT10P55197 1068 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 RPS18P62269 152 aaKnown RBP23.3■■□□□ 1.32
LSM4-202ENST00000593564 XIAPP98170 497 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 CAPRIN2Q6IMN6 1127 aaKnown RBP23.3■■□□□ 1.32
LSM4-202ENST00000593564 TMEM126BQ8IUX1 230 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 NAT14Q8WUY8 206 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 LRFN5Q96NI6 719 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 FERMT1Q9BQL6 677 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 CCM2Q9BSQ5 444 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 FAM8A1Q9UBU6 413 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 FARSAQ9Y285 508 aaKnown RBP23.3■■□□□ 1.32
LSM4-202ENST00000593564 AAR2Q9Y312 384 aaKnown RBP23.3■■□□□ 1.32
LSM4-202ENST00000593564 HEBP2Q9Y5Z4 205 aa23.3■■□□□ 1.32
LSM4-202ENST00000593564 RALBP11234 206 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 PRLHRP49683 370 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 COPS2P61201 443 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 GPS2Q13227 327 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 IZUMO3Q5VZ72 239 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 DAAM2Q86T65 1068 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 HM13Q8TCT9 377 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 MR1Q95460 341 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 ULK4Q96C45 1275 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 DCUN1D1Q96GG9 259 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 C19orf43Q9BQ61 176 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 APOL2Q9BQE5 337 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 SOHLH2Q9NX45 425 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 CRLS1Q9UJA2 301 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 POMT2Q9UKY4 750 aa23.29■■□□□ 1.32
LSM4-202ENST00000593564 CRTAMO95727 393 aa23.28■■□□□ 1.32
LSM4-202ENST00000593564 POLBP06746 335 aa23.28■■□□□ 1.32
LSM4-202ENST00000593564 ARCN1P48444 511 aaKnown RBP23.28■■□□□ 1.32
LSM4-202ENST00000593564 PRKAA1Q13131 559 aa23.28■■□□□ 1.32
LSM4-202ENST00000593564 MSLNQ13421 630 aaPredicted RBP23.28■■□□□ 1.32
LSM4-202ENST00000593564 IL10RAQ13651 578 aa23.28■■□□□ 1.32
LSM4-202ENST00000593564 GSE1Q14687 1217 aa23.28■■□□□ 1.32
LSM4-202ENST00000593564 CCDC181Q5TID7 509 aa23.28■■□□□ 1.32
LSM4-202ENST00000593564 CFAP206Q8IYR0 622 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms