RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 PTRHD1Q6GMV3 140 aaKnown RBP9.86□□□□□ -0.83
BRCA1-227ENST00000591849 MRNIPQ6NTE8 343 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 WDR74Q6RFH5 385 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-227ENST00000591849 SYDE1Q6ZW31 735 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-227ENST00000591849 MICALCLQ6ZW33 695 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 TMPRSS9Q7Z410 1059 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 CREG2Q8IUH2 290 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 C17orf53Q8N3J3 647 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-227ENST00000591849 AGBL5Q8NDL9 886 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 RCBTB1Q8NDN9 531 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 MCUQ8NE86 351 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 GSDMBQ8TAX9 411 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 HNRNPLLQ8WVV9 542 aaKnown RBP9.86□□□□□ -0.83
BRCA1-227ENST00000591849 ZDHHC12Q96GR4 267 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 SLC46A1Q96NT5 459 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 INSM2Q96T92 566 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-227ENST00000591849 KIFC1Q9BW19 673 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 MRM3Q9HC36 420 aaKnown RBP9.86□□□□□ -0.83
BRCA1-227ENST00000591849 SLC40A1Q9NP59 571 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 SOX13Q9UN79 622 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 LHX6Q9UPM6 363 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 PCDHGA8Q9Y5G5 932 aa9.86□□□□□ -0.83
BRCA1-227ENST00000591849 PRAMEF33A0A0G2JMD5 474 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 UBA6A0AVT1 1052 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 TAF4O00268 1085 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 LIN7AO14910 233 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 HGSO14964 777 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 OR1I1O60431 355 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 ITGA2BP08514 1039 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 MTHFD1P11586 935 aaKnown RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 MLLT3P42568 568 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 MAGEA6P43360 314 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 ARL4DP49703 201 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 PDX1P52945 283 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 CSE1LP55060 971 aaKnown RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 PLOD1Q02809 727 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 ACVR1Q04771 509 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 RPA4Q13156 261 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 PTK6Q13882 451 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 BOP1Q14137 746 aaKnown RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 DHX34Q14147 1143 aaKnown RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 GPR18Q14330 331 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 TMED2Q15363 201 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 DNAJC21Q5F1R6 531 aaKnown RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 BROXQ5VW32 411 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 IZUMO3Q5VZ72 239 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 ARMC3Q5W041 872 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 IRGCQ6NXR0 463 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 PACS1Q6VY07 963 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 SYT10Q6XYQ8 523 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 ZNF574Q6ZN55 896 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 LDB1Q86U70 411 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 FAM129CQ86XR2 697 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 SLITRK4Q8IW52 837 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 ZNF248Q8NDW4 579 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 SPDYE1Q8NFV5 336 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 JPH3Q8WXH2 748 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 ZNF669Q96BR6 464 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 MFSD3Q96ES6 412 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 CCDC97Q96F63 343 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 PRR11Q96HE9 360 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-227ENST00000591849 SGSM3Q96HU1 749 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 TGM7Q96PF1 710 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 COG4Q9H9E3 785 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 TMEM9Q9P0T7 183 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 PCYOX1Q9UHG3 505 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 PRSS21Q9Y6M0 314 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 IGSF10Q6WRI0 2623 aa9.85□□□□□ -0.83
BRCA1-227ENST00000591849 RP1P56715 2156 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 LRP4O75096 1905 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 URB1O60287 2271 aaKnown RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 FAM237BA0A1B0GVD1 139 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 PRR19A6NJB7 356 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 EFCAB7A8K855 629 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 DNALI1O14645 258 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 PRMT5O14744 637 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 CAPN5O15484 640 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 TLX3O43711 291 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 SGTAO43765 313 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 DXOO77932 396 aaKnown RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 TMEM63AO94886 807 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 CAPNS1P04632 268 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 APOA4P06727 396 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 ITIH1P19827 911 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 PDHA2P29803 388 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 SLC5A2P31639 672 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 CSF2RBP32927 897 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 PREPP48147 710 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 ETF1P62495 437 aaKnown RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 PRKAA1Q13131 559 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 C16orf72Q14CZ0 275 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 DUS1LQ6P1R4 473 aaKnown RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 C19orf48Q6RUI8 117 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 ZNF534Q76KX8 674 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 CAND1Q86VP6 1230 aaKnown RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 OOSP2Q86WS3 158 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 MPP5Q8N3R9 675 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 LILRA3Q8N6C8 439 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-227ENST00000591849 NAT8LQ8N9F0 302 aa9.84□□□□□ -0.83
BRCA1-227ENST00000591849 PHC3Q8NDX5 983 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms