RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 A6NCN8 305 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 RSPH10B2B2RC85 870 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 GOLGA8SH3BPF8 625 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 SGK1O00141 431 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 LIN7AO14910 233 aaPredicted RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 MCF2LO15068 1137 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 BIRC5O15392 142 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 TEX28O15482 410 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 PLOD3O60568 738 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 SMIM24O75264 130 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 LUC7L3O95232 432 aaKnown RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 CCNDBP1O95273 360 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CLDN14O95500 239 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CAVIN2O95810 425 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 MLYCDO95822 493 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 ECDO95905 644 aaPredicted RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 RSPH10BP0C881 870 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CCDC166P0CW27 439 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 THEGLP0DJG4 465 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 FGF3P11487 239 aaPredicted RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 ZNF182P17025 639 aaPredicted RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 DDX5P17844 614 aaKnown RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 CHMP24386 653 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CCKBRP32239 447 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CETN2P41208 172 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 RAD23BP54727 409 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 VCPP55072 806 aaKnown RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 BRWD1-AS2P59051 145 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 DSTNP60981 165 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 RELQ04864 619 aaPredicted RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 DLG1Q12959 904 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CSTF3Q12996 717 aaKnown RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 DPYSQ14117 519 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 SLC39A14Q15043 492 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 SF3B4Q15427 424 aaKnown RBP eCLIP3.44□□□□□ -1.865e-12■■■■■ 49.6
VMP1-212ENST00000591782 CALCRLQ16602 461 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 WHAMMP3Q1A5X7 153 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CAVIN4Q5BKX8 364 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CFAP157Q5JU67 520 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 METTL11BQ5VVY1 283 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 C9orf57Q5W0N0 161 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 GGNBP1Q5YKI7 109 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 NEK5Q6P3R8 708 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 KLC3Q6P597 504 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CNSTQ6PJW8 725 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 SYT10Q6XYQ8 523 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 C1orf122Q6ZSJ8 110 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 PLEKHM3Q6ZWE6 761 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 IKBIPQ70UQ0 350 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 TBC1D1Q86TI0 1168 aaPredicted RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 ADSSL1Q8N142 457 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 SPC24Q8NBT2 197 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 LMO3Q8TAP4 145 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 ZFAND2BQ8WV99 257 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 ARHGAP45Q92619 1136 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 SGCDQ92629 289 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 IGSF8Q969P0 613 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 RPGRIP1Q96KN7 1286 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CEP19Q96LK0 163 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CCDC43Q96MW1 224 aaKnown RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 CGREF1Q99674 301 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 KIFC3Q9BVG8 833 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 SLCO5A1Q9H2Y9 848 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 SLC28A3Q9HAS3 691 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 ZCCHC17Q9NP64 241 aaKnown RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.44□□□□□ -1.868e-8■□□□□ 9.4
VMP1-212ENST00000591782 HPF1Q9NWY4 346 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 NKIRAS2Q9NYR9 191 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 C1RLQ9NZP8 487 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 ZNF624Q9P2J8 865 aaPredicted RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 MALT1Q9UDY8 824 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 RASAL2Q9UJF2 1139 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 CCPG1Q9ULG6 757 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 TTC7AQ9ULT0 858 aaPredicted RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 PCDHGB1Q9Y5G3 927 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.44□□□□□ -1.86
VMP1-212ENST00000591782 ERICH3Q5RHP9 1530 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 KIF7Q2M1P5 1343 aa3.44□□□□□ -1.86
VMP1-212ENST00000591782 NPC1L1Q9UHC9 1359 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 A0A0G2JPF8 293 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 SYNDIG1LA6NDD5 238 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 PGPEP1LA6NFU8 196 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 CCDC69A6NI79 296 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 BTBD18B2RXH4 712 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 HNRNPCL3B7ZW38 293 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 SPECC1L-ADORA2AF8WAN1 911 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 ACOT8O14734 319 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 MID1O15344 667 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 STX6O43752 255 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 TIPRLO75663 272 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 PMS2P2O95744 297 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 LINC00271P0C7V0 271 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 HNRNPCL4P0DMR1 293 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 SRCP12931 536 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 DAOP14920 347 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 IL10P22301 178 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 NFKBIAP25963 317 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 U2AF2P26368 475 aaKnown RBP eCLIP3.43□□□□□ -1.864e-26■■■■□ 19.9
VMP1-212ENST00000591782 CHMLP26374 656 aa3.43□□□□□ -1.86
VMP1-212ENST00000591782 HSD17B2P37059 387 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms