RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 SPNS2Q8IVW8 549 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 BMPERQ8N8U9 685 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 KCNE4Q8WWG9 221 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 AHCYL2Q96HN2 611 aaKnown RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 ZNF514Q96K75 400 aaPredicted RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 CAPZA3Q96KX2 299 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 C12orf66Q96MD2 445 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 DDX47Q9H0S4 455 aaKnown RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 OR52A5Q9H2C5 316 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 SIDT1Q9NXL6 827 aaKnown RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 PDP2Q9P2J9 529 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 RIMKLBQ9ULI2 386 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 DNMT3AQ9Y6K1 912 aaPredicted RBP9.65□□□□□ -0.86
PTPN2-208ENST00000589216 ATMQ13315 3056 aa9.65□□□□□ -0.86
PTPN2-208ENST00000589216 TMX2-CTNND1H3BSU7 103 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 GOLGA8MH3BSY2 632 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 GAS8O95995 478 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 C9P02748 559 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 SLC35G4P0C7Q5 338 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 RALBP11234 206 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 MLLT3P42568 568 aaPredicted RBP9.64□□□□□ -0.87
PTPN2-208ENST00000589216 FNTAP49354 379 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 PRAMEP78395 509 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 CLN3Q13286 438 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 ITIH4Q14624 930 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 PCID2Q5JVF3 399 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 CAPRIN2Q6IMN6 1127 aaKnown RBP9.64□□□□□ -0.87
PTPN2-208ENST00000589216 LRRC8BQ6P9F7 803 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 ARHGAP22Q7Z5H3 698 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 FAM129CQ86XR2 697 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 CFAP206Q8IYR0 622 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 LSMEM2Q8N112 164 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 AVL9Q8NBF6 648 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 ZNF248Q8NDW4 579 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 OR6P1Q8NGX9 317 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 ANP32BQ92688 251 aaKnown RBP9.64□□□□□ -0.87
PTPN2-208ENST00000589216 USP7Q93009 1102 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 ART4Q93070 314 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 SH3KBP1Q96B97 665 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 MFSD3Q96ES6 412 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 PPM1MQ96MI6 270 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 SERPINB12Q96P63 405 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 TGM7Q96PF1 710 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 CMKLR1Q99788 373 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 CTRCQ99895 268 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.64□□□□□ -0.87
PTPN2-208ENST00000589216 CPNE5Q9HCH3 593 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 APMAPQ9HDC9 416 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 HOMER3Q9NSC5 361 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 IL1RAPL1Q9NZN1 696 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 PCDHGA7Q9Y5G6 932 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 KALRNO60229 2985 aa9.64□□□□□ -0.87
PTPN2-208ENST00000589216 PIEZO2Q9H5I5 2752 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 EFCAB7A8K855 629 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 GOLGA8KD6RF30 607 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 GOLGA8TH3BQL2 631 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 CES2O00748 559 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 CAPN5O15484 640 aaPredicted RBP9.63□□□□□ -0.87
PTPN2-208ENST00000589216 KLK10O43240 276 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 ZW10O43264 779 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 KCNJ13O60928 360 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 BANF1O75531 89 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 ITGB6P18564 788 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 NSG1P42857 185 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 PTGIRP43119 386 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 MAGEA3P43357 314 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 ARCN1P48444 511 aaKnown RBP9.63□□□□□ -0.87
PTPN2-208ENST00000589216 CSE1LP55060 971 aaKnown RBP9.63□□□□□ -0.87
PTPN2-208ENST00000589216 TRA2AQ13595 282 aaKnown RBP eCLIP9.63□□□□□ -0.87
PTPN2-208ENST00000589216 BOP1Q14137 746 aaKnown RBP9.63□□□□□ -0.87
PTPN2-208ENST00000589216 GSE1Q14687 1217 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 BRD3Q15059 726 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 PLCL1Q15111 1095 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 PAPD7Q5XG87 772 aaKnown RBP9.63□□□□□ -0.87
PTPN2-208ENST00000589216 ANKS6Q68DC2 871 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 IRGCQ6NXR0 463 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 C4orf22Q6V702 233 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 CERS6Q6ZMG9 384 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 FAM92BQ6ZTR7 304 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 PDZD3Q86UT5 571 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 VASH2Q86V25 355 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 CREG2Q8IUH2 290 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 AGBL5Q8NDL9 886 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 OR4L1Q8NH43 312 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 HEXDCQ8WVB3 486 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 TMEM159Q96B96 161 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 C9orf72Q96LT7 481 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 CCM2Q9BSQ5 444 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 HGH1Q9BTY7 390 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 KIFC1Q9BW19 673 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 IL22Q9GZX6 179 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 EPB41L1Q9H4G0 881 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 CATSPERZQ9NTU4 200 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 SLC24A2Q9UI40 661 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 ACSL6Q9UKU0 697 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 SOX13Q9UN79 622 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 B3GALT1Q9Y5Z6 326 aa9.63□□□□□ -0.87
PTPN2-208ENST00000589216 SMG1Q96Q15 3661 aaKnown RBP9.62□□□□□ -0.87
PTPN2-208ENST00000589216 GOLGA6L10A0A0M3HER8 536 aa9.62□□□□□ -0.87
PTPN2-208ENST00000589216 IQCF5A8MTL0 148 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms