RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZBTB11O95625 1053 aaPredicted RBP17.95■□□□□ 0.46
CCDC43-204ENST00000588687 PBLDP30039 288 aaPredicted RBP17.95■□□□□ 0.46
CCDC43-204ENST00000588687 NR2C2P49116 596 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 RPS15P62841 145 aaKnown RBP17.95■□□□□ 0.46
CCDC43-204ENST00000588687 ITGA9Q13797 1035 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 PTPRCAPQ14761 206 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 PPP2R5EQ16537 467 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 PLEKHS1Q5SXH7 462 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 FAM69BQ5VUD6 431 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 FBXO38Q6PIJ6 1188 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 OOSP2Q86WS3 158 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 TMEM126BQ8IUX1 230 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 DSELQ8IZU8 1212 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 ZNF567Q8N184 647 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 SLC25A41Q8N5S1 370 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 OR8K5Q8NH50 307 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 BLOC1S5Q8TDH9 187 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 FCRL5Q96RD9 977 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 MAK16Q9BXY0 300 aaKnown RBP17.95■□□□□ 0.46
CCDC43-204ENST00000588687 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCDC43-204ENST00000588687 POMT2Q9UKY4 750 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 HYOU1Q9Y4L1 999 aa17.95■□□□□ 0.46
CCDC43-204ENST00000588687 UBA6A0AVT1 1052 aaPredicted RBP17.94■□□□□ 0.46
CCDC43-204ENST00000588687 SYCE3A1L190 88 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 OR6C74A6NCV1 312 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 MGAT4DA6NG13 374 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 F5H423 210 aaPredicted RBP17.94■□□□□ 0.46
CCDC43-204ENST00000588687 AGFG2O95081 481 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 HLA-DPA1P20036 260 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 XRCC4Q13426 336 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 BCL7AQ4VC05 210 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 FNBP1LQ5T0N5 605 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 FHL5Q5TD97 284 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 LILRA3Q8N6C8 439 aaPredicted RBP17.94■□□□□ 0.46
CCDC43-204ENST00000588687 EFCAB3Q8N7B9 438 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 ENDOVQ8N8Q3 282 aaKnown RBP17.94■□□□□ 0.46
CCDC43-204ENST00000588687 OR2L2Q8NH16 312 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 SSC4DQ8WTU2 575 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 TFB1MQ8WVM0 346 aaKnown RBP17.94■□□□□ 0.46
CCDC43-204ENST00000588687 ZFPM2Q8WW38 1151 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 MR1Q95460 341 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 LINC00615Q96LM1 132 aaPredicted RBP17.94■□□□□ 0.46
CCDC43-204ENST00000588687 C12orf66Q96MD2 445 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 TLR10Q9BXR5 811 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 ACSS2Q9NR19 701 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 KCND1Q9NSA2 647 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 SEC16AO15027 2179 aa17.94■□□□□ 0.46
CCDC43-204ENST00000588687 PRAMEF1O95521 474 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 RAB40ALP0C0E4 278 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 MSL3P1P0C860 447 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 ARCN1P48444 511 aaKnown RBP17.93■□□□□ 0.46
CCDC43-204ENST00000588687 ARL4DP49703 201 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 CCL11P51671 97 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 ITGA1P56199 1179 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 TCEAL1Q15170 157 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 DET1Q7L5Y6 550 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 RHOT2Q8IXI1 618 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 FDCSPQ8NFU4 85 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 IPMKQ8NFU5 416 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 QKIQ96PU8 341 aaKnown RBP eCLIP17.93■□□□□ 0.46
CCDC43-204ENST00000588687 NUDT9Q9BW91 350 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 SPTLC3Q9NUV7 552 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 PCMTD2Q9NV79 361 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 DDX56Q9NY93 547 aaKnown RBP17.93■□□□□ 0.46
CCDC43-204ENST00000588687 TCFL5Q9UL49 500 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 PCDHGB7Q9Y5F8 929 aa17.93■□□□□ 0.46
CCDC43-204ENST00000588687 AGAP14A8MT82 685 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 MEN1O00255 615 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 CST8O60676 142 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 LCA5LO95447 670 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 GSDMDP57764 484 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 TPM4P67936 248 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 PDE1BQ01064 536 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 LONRF2Q1L5Z9 754 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 ZNF658BQ4V348 819 aaPredicted RBP17.92■□□□□ 0.46
CCDC43-204ENST00000588687 JMJD6Q6NYC1 403 aaPredicted RBP17.92■□□□□ 0.46
CCDC43-204ENST00000588687 DAAM2Q86T65 1068 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 RBMXL3Q8N7X1 1067 aaKnown RBP17.92■□□□□ 0.46
CCDC43-204ENST00000588687 CHP1Q99653 195 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 NRTNQ99748 197 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 NLNQ9BYT8 704 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 PITPNM3Q9BZ71 974 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 KLHL8Q9P2G9 620 aaPredicted RBP17.92■□□□□ 0.46
CCDC43-204ENST00000588687 ACSL5Q9ULC5 683 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 PKP3Q9Y446 797 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 ARL5AQ9Y689 179 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 ABCA12Q86UK0 2595 aa17.92■□□□□ 0.46
CCDC43-204ENST00000588687 TCP11X1B4DZS4 312 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 DDX3YO15523 660 aaKnown RBP17.91■□□□□ 0.46
CCDC43-204ENST00000588687 TMEM63AO94886 807 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 COMTP21964 271 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 AKT1P31749 480 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 SLC1A1P43005 524 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 XIAPP98170 497 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 MPP3Q13368 585 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 MSLNQ13421 630 aaPredicted RBP17.91■□□□□ 0.46
CCDC43-204ENST00000588687 LLGL1Q15334 1064 aa17.91■□□□□ 0.46
CCDC43-204ENST00000588687 INPP5JQ15735 1006 aaPredicted RBP17.91■□□□□ 0.46
CCDC43-204ENST00000588687 ZNF385CQ66K41 422 aaPredicted RBP17.91■□□□□ 0.46
CCDC43-204ENST00000588687 SLC6A19Q695T7 634 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms