RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 C16orf72Q14CZ0 275 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 KIAA0930Q6ICG6 404 aaPredicted RBP15.7■□□□□ 0.1
RETREG3-206ENST00000588423 ARHGAP22Q7Z5H3 698 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 HOOK3Q86VS8 718 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 LILRA3Q8N6C8 439 aaPredicted RBP15.7■□□□□ 0.1
RETREG3-206ENST00000588423 GPR150Q8NGU9 434 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 MFSD3Q96ES6 412 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 C12orf66Q96MD2 445 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 INSM2Q96T92 566 aaPredicted RBP15.7■□□□□ 0.1
RETREG3-206ENST00000588423 RAB33BQ9H082 229 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 ZMYND15Q9H091 742 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 OR52A5Q9H2C5 316 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 IMP3Q9NV31 184 aaKnown RBP15.7■□□□□ 0.1
RETREG3-206ENST00000588423 TMEM9Q9P0T7 183 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 SAMD15Q9P1V8 674 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 EPHA6Q9UF33 1036 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 ASIC3Q9UHC3 531 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 COLEC10Q9Y6Z7 277 aa15.7■□□□□ 0.1
RETREG3-206ENST00000588423 PRAMEF33A0A0G2JMD5 474 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 FAM237BA0A1B0GVD1 139 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 PMS2P1A4D2B8 440 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 TOX3O15405 576 aaPredicted RBP15.69■□□□□ 0.1
RETREG3-206ENST00000588423 OR1I1O60431 355 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 POLBP06746 335 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 ANKRD34CP0C6C1 535 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 AMD1P17707 334 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 ARNTP27540 789 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 MAPK9P45984 424 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 CAPZBP47756 277 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 PPM1FP49593 454 aaPredicted RBP15.69■□□□□ 0.1
RETREG3-206ENST00000588423 ETF1P62495 437 aaKnown RBP15.69■□□□□ 0.1
RETREG3-206ENST00000588423 SEMA3AQ14563 771 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 KLHL35Q6PF15 583 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 FOXR1Q6PIV2 292 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 TMEM135Q86UB9 458 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 AGBL5Q8NDL9 886 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 RCBTB1Q8NDN9 531 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 ZNF248Q8NDW4 579 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 SPDYE1Q8NFV5 336 aaPredicted RBP15.69■□□□□ 0.1
RETREG3-206ENST00000588423 RMDN2Q96LZ7 410 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 TSSK1BQ9BXA7 367 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 KIR3DX1Q9H7L2 352 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 FAM8A1Q9UBU6 413 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 ACSL6Q9UKU0 697 aa15.69■□□□□ 0.1
RETREG3-206ENST00000588423 SMAPO00193 183 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 IFRD1O00458 451 aaPredicted RBP15.68■□□□□ 0.1
RETREG3-206ENST00000588423 PRMT5O14744 637 aaPredicted RBP15.68■□□□□ 0.1
RETREG3-206ENST00000588423 NVLO15381 856 aaKnown RBP15.68■□□□□ 0.1
RETREG3-206ENST00000588423 RRP8O43159 456 aaKnown RBP15.68■□□□□ 0.1
RETREG3-206ENST00000588423 VAPBO95292 243 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 IVDP26440 423 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 CASQ1P31415 396 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 CSTF2P33240 577 aaKnown RBP eCLIP15.68■□□□□ 0.1
RETREG3-206ENST00000588423 ARCN1P48444 511 aaKnown RBP15.68■□□□□ 0.1
RETREG3-206ENST00000588423 DR1Q01658 176 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 DHX34Q14147 1143 aaKnown RBP15.68■□□□□ 0.1
RETREG3-206ENST00000588423 RNF187Q5TA31 235 aaPredicted RBP15.68■□□□□ 0.1
RETREG3-206ENST00000588423 MRNIPQ6NTE8 343 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 CASC4Q6P4E1 433 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 LRRC6Q86X45 466 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 KLHL7Q8IXQ5 586 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 TCF12Q99081 682 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 CARD6Q9BX69 1037 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 MARCH4Q9P2E8 410 aaPredicted RBP15.68■□□□□ 0.1
RETREG3-206ENST00000588423 PISDQ9UG56 409 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 CFAP20Q9Y6A4 193 aaKnown RBP15.68■□□□□ 0.1
RETREG3-206ENST00000588423 KNTC1P50748 2209 aa15.68■□□□□ 0.1
RETREG3-206ENST00000588423 SLC5A10A0PJK1 596 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 B4E171 279 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 GOLGA8MH3BSY2 632 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 PFDN6O15212 129 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 USP1O94782 785 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 HGFP14210 728 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 TYRP1P17643 537 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 ITIH1P19827 911 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 OGNP20774 298 aaKnown RBP15.67■□□□□ 0.1
RETREG3-206ENST00000588423 RPS3P23396 243 aaKnown RBP eCLIP15.67■□□□□ 0.13e-7■■■□□ 15.9
RETREG3-206ENST00000588423 MPSTP25325 297 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 PDHA2P29803 388 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 TSPAN7P41732 249 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 ADARP55265 1226 aaKnown RBP15.67■□□□□ 0.1
RETREG3-206ENST00000588423 TYSND1Q2T9J0 566 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 ANKRD20A4Q4UJ75 823 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 CES3Q6UWW8 571 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 LRRC69Q6ZNQ3 347 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 SDCCAG8Q86SQ7 713 aaPredicted RBP15.67■□□□□ 0.1
RETREG3-206ENST00000588423 PDZD3Q86UT5 571 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 JAMLQ86YT9 394 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 C17orf53Q8N3J3 647 aaPredicted RBP15.67■□□□□ 0.1
RETREG3-206ENST00000588423 ELMO1Q92556 727 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 ZDHHC12Q96GR4 267 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 SIGLEC10Q96LC7 697 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 C9orf72Q96LT7 481 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 DPH1Q9BZG8 443 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 P2RY12Q9H244 342 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 MVB12BQ9H7P6 319 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 SLC24A2Q9UI40 661 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 GNPTGQ9UJJ9 305 aa15.67■□□□□ 0.1
RETREG3-206ENST00000588423 TPRP12270 2363 aaKnown RBP15.67■□□□□ 0.1
RETREG3-206ENST00000588423 ZCWPW2A0A1B0GU75 182 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms