RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 CDKL3Q8IVW4 592 aaPredicted RBP16.54■□□□□ 0.24
TMED1-203ENST00000588259 SPDYE1Q8NFV5 336 aaPredicted RBP16.54■□□□□ 0.24
TMED1-203ENST00000588259 INSM2Q96T92 566 aaPredicted RBP16.54■□□□□ 0.24
TMED1-203ENST00000588259 CD180Q99467 661 aa16.54■□□□□ 0.24
TMED1-203ENST00000588259 FAM118BQ9BPY3 351 aa16.54■□□□□ 0.24
TMED1-203ENST00000588259 CYSRT1A8MQ03 144 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 C21orf140B9A014 251 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 KCNN4O15554 427 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 SRP72O76094 671 aaKnown RBP16.53■□□□□ 0.24
TMED1-203ENST00000588259 PMS2P54278 862 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 EIF3EP60228 445 aaKnown RBP16.53■□□□□ 0.24
TMED1-203ENST00000588259 HSD11B2P80365 405 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 FOXK1P85037 733 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 TMPRSS15P98073 1019 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 OTUD4Q01804 1114 aaKnown RBP16.53■□□□□ 0.24
TMED1-203ENST00000588259 KLRB1Q12918 225 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 TBX2Q13207 712 aaPredicted RBP16.53■□□□□ 0.24
TMED1-203ENST00000588259 OLIG2Q13516 323 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 GPR19Q15760 415 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 TMTC4Q5T4D3 741 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 DARS2Q6PI48 645 aaKnown RBP16.53■□□□□ 0.24
TMED1-203ENST00000588259 ASB18Q6ZVZ8 466 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 KMT5CQ86Y97 462 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 TEX19Q8NA77 164 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 OR2L2Q8NH16 312 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 ACTL9Q8TC94 416 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 SLC24A2Q9UI40 661 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 ACSL5Q9ULC5 683 aa16.53■□□□□ 0.24
TMED1-203ENST00000588259 BSNQ9UPA5 3926 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 RP1L1Q8IWN7 2480 aaPredicted RBP16.52■□□□□ 0.24
TMED1-203ENST00000588259 GOLGA6L3A6NEY3 463 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 C5orf60A6NFR6 353 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 DDX3YO15523 660 aaKnown RBP16.52■□□□□ 0.24
TMED1-203ENST00000588259 CRTAMO95727 393 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 PTMAP06454 111 aaKnown RBP16.52■□□□□ 0.24
TMED1-203ENST00000588259 ITGALP20701 1170 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 CYLC1P35663 651 aaPredicted RBP16.52■□□□□ 0.24
TMED1-203ENST00000588259 RPS18P62269 152 aaKnown RBP16.52■□□□□ 0.24
TMED1-203ENST00000588259 RPS15P62841 145 aaKnown RBP16.52■□□□□ 0.24
TMED1-203ENST00000588259 PRKAA1Q13131 559 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 FAM199XQ6PEV8 388 aaPredicted RBP16.52■□□□□ 0.24
TMED1-203ENST00000588259 FBXO38Q6PIJ6 1188 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 CFAP206Q8IYR0 622 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 TC2NQ8N9U0 490 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 MR1Q95460 341 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 LRRC45Q96CN5 670 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 RMDN2Q96LZ7 410 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 RUFY1Q96T51 708 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 GORASP1Q9BQQ3 440 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 FAM96AQ9H5X1 160 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 KIR3DX1Q9H7L2 352 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 TLK1Q9UKI8 766 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 PLAAQ9Y263 795 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 AAR2Q9Y312 384 aaKnown RBP16.52■□□□□ 0.24
TMED1-203ENST00000588259 PCDHGA6Q9Y5G7 932 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 COLEC10Q9Y6Z7 277 aa16.52■□□□□ 0.24
TMED1-203ENST00000588259 COL12A1Q99715 3063 aa16.52■□□□□ 0.23
TMED1-203ENST00000588259 SPTBP11277 2137 aa16.52■□□□□ 0.23
TMED1-203ENST00000588259 TNRC6AQ8NDV7 1962 aaKnown RBP16.51■□□□□ 0.23
TMED1-203ENST00000588259 GSAPA4D1B5 854 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 KLHL33A6NCF5 533 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 CFAP99D6REC4 459 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 K7EM74 188 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 PJA2O43164 708 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 CPNE3O75131 537 aaKnown RBP16.51■□□□□ 0.23
TMED1-203ENST00000588259 SCRG1O75711 98 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 DNAJB5O75953 348 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 IPO7O95373 1038 aaKnown RBP16.51■□□□□ 0.23
TMED1-203ENST00000588259 ZBTB11O95625 1053 aaPredicted RBP16.51■□□□□ 0.23
TMED1-203ENST00000588259 RBP3P10745 1247 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 POLR2CP19387 275 aaPredicted RBP16.51■□□□□ 0.23
TMED1-203ENST00000588259 CDH3P22223 829 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 CETN2P41208 172 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 COPS2P61201 443 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 TUBB4BP68371 445 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 TUBB2AQ13885 445 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 BCL7AQ4VC05 210 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 ANKRD20A2Q5SQ80 823 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 ANKRD20A1Q5TYW2 823 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 ANKRD20A3Q5VUR7 823 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 BPHLQ86WA6 291 aaPredicted RBP16.51■□□□□ 0.23
TMED1-203ENST00000588259 CCDC170Q8IYT3 715 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 OR4E2Q8NGC2 313 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 OR13C4Q8NGS5 318 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 CCDC110Q8TBZ0 833 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 ULK4Q96C45 1275 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 FCRL4Q96PJ5 515 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 TUBB2BQ9BVA1 445 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 TLR10Q9BXR5 811 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 OSBPL8Q9BZF1 889 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 FANCEQ9HB96 536 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 SEMA5BQ9P283 1151 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 HEBP2Q9Y5Z4 205 aa16.51■□□□□ 0.23
TMED1-203ENST00000588259 CCL22O00626 93 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 PYGMP11217 842 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 NDUFS1P28331 727 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 PTPN4P29074 926 aa16.5■□□□□ 0.23
TMED1-203ENST00000588259 CTNNA1P35221 906 aaKnown RBP16.5■□□□□ 0.23
TMED1-203ENST00000588259 KPNA2P52292 529 aaKnown RBP16.5■□□□□ 0.23
TMED1-203ENST00000588259 SPARCL1Q14515 664 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms