RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 COG4Q9H9E3 785 aa10.16□□□□□ -0.78
CLPTM1-207ENST00000587537 CYP4F12Q9HCS2 524 aa10.16□□□□□ -0.78
CLPTM1-207ENST00000587537 FGF22Q9HCT0 170 aa10.16□□□□□ -0.78
CLPTM1-207ENST00000587537 SPASTQ9UBP0 616 aa10.16□□□□□ -0.78
CLPTM1-207ENST00000587537 PCOLCE2Q9UKZ9 415 aa10.16□□□□□ -0.78
CLPTM1-207ENST00000587537 SUFUQ9UMX1 484 aa10.16□□□□□ -0.78
CLPTM1-207ENST00000587537 MED16Q9Y2X0 877 aa10.16□□□□□ -0.78
CLPTM1-207ENST00000587537 TMEM98Q9Y2Y6 226 aa10.16□□□□□ -0.78
CLPTM1-207ENST00000587537 PRSS21Q9Y6M0 314 aa10.16□□□□□ -0.78
CLPTM1-207ENST00000587537 CSNK1G3Q9Y6M4 447 aa10.16□□□□□ -0.78
CLPTM1-207ENST00000587537 MUC3AQ02505 3323 aa10.16□□□□□ -0.78
CLPTM1-207ENST00000587537 FAM86C2PA6NEL3 165 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 LRP3O75074 770 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 SYF2O95926 243 aaKnown RBP10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 SLC35G4P0C7Q5 338 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 CCDC166P0CW27 439 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 PYGBP11216 843 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 CTSEP14091 401 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 BRAFP15056 766 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 ITPKAP23677 461 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 CCR7P32248 378 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 CA5AP35218 305 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 HALP42357 657 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 GNPDA1P46926 289 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 RXRGP48443 463 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 MAGOHP61326 146 aaKnown RBP10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 HSPA14Q0VDF9 509 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 ASPHQ12797 758 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 BOP1Q14137 746 aaKnown RBP10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 ALG11Q2TAA5 492 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 ZNF658BQ4V348 819 aaPredicted RBP10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 TTC23LQ6PF05 361 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 SLC23A3Q6PIS1 610 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 PAQR3Q6TCH7 311 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 UNC5DQ6UXZ4 953 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 SH2D5Q6ZV89 423 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 CMC1Q7Z7K0 106 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 EXOC3L1Q86VI1 746 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 GKN2Q86XP6 184 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 CEP97Q8IW35 865 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 PHACTR4Q8IZ21 702 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 CYP4X1Q8N118 509 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 BANPQ8N9N5 519 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 FBXO15Q8NCQ5 510 aaPredicted RBP10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 STAG3L4Q8TBR4 150 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 GPBAR1Q8TDU6 330 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 ZFPM2Q8WW38 1151 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 OR1E3Q8WZA6 343 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 CCDC126Q96EE4 140 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 MRPL57Q9BQC6 102 aaKnown RBP10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 LRFN3Q9BTN0 628 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 TRIM54Q9BYV2 358 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 VPS11Q9H270 941 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 MRPL46Q9H2W6 279 aaKnown RBP10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 CAB39LQ9H9S4 337 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 SARS2Q9NP81 518 aaKnown RBP10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 PCMTD2Q9NV79 361 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 NKIRAS1Q9NYS0 192 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 APOBEC3BQ9UH17 382 aaKnown RBP10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 MOSPD1Q9UJG1 213 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 SLC6A14Q9UN76 642 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 GPSM3Q9Y4H4 160 aa10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 ZFC3H1O60293 1989 aaKnown RBP10.15□□□□□ -0.78
CLPTM1-207ENST00000587537 NEMP2A6NFY4 417 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 PRR19A6NJB7 356 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 PHGDHO43175 533 aaKnown RBP10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 MATN4O95460 622 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 CER1O95813 267 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 CATP04040 527 aaKnown RBP10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 JUNDP17535 347 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 TAC1P20366 129 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 CYP2A7P20853 494 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 MAOBP27338 520 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 HSD17B2P37059 387 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 CTSKP43235 329 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 ABCG1P45844 678 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 PRKAA2P54646 552 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 AP1S2P56377 157 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 CDKL1Q00532 357 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 TIAL1Q01085 375 aaKnown RBP eCLIP10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 CTBSQ01459 385 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 EIF2B5Q13144 721 aaKnown RBP10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 TUBB8Q3ZCM7 444 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 METTL2BQ6P1Q9 378 aaKnown RBP10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 CRTC3Q6UUV7 619 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 PRR23BQ6ZRT6 265 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 ARMCX6Q7L4S7 300 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 CHST15Q7LFX5 561 aaPredicted RBP10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 PDZD3Q86UT5 571 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 HID1Q8IV36 788 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 RBM12BQ8IXT5 1001 aaKnown RBP10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 CFAP206Q8IYR0 622 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 KRT222Q8N1A0 295 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 RAB42Q8N4Z0 105 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 DEFB119Q8N690 84 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 SIDT2Q8NBJ9 832 aaKnown RBP10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 PIGKQ92643 395 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 KIAA1191Q96A73 305 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 LINGO1Q96FE5 620 aa10.14□□□□□ -0.79
CLPTM1-207ENST00000587537 NUSAP1Q9BXS6 441 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms