RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 MAGED1Q9Y5V3 778 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-205ENST00000587327 GREB1Q4ZG55 1949 aa16.61■□□□□ 0.25
PRKCSH-205ENST00000587327 ACSL4O60488 711 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 NOL3O60936 208 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 SEC14L2O76054 403 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 ESR1P03372 595 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 ZDHHC11BP0C7U3 371 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 JAK1P23458 1154 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 SHMT2P34897 504 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 MTHFRP42898 656 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 CLCN7P51798 805 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 CDH4P55283 916 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 PCBP2Q15366 365 aaKnown RBP eCLIP16.6■□□□□ 0.251e-6■■■■■ 31.4
PRKCSH-205ENST00000587327 NR6A1Q15406 480 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 AAK1Q2M2I8 961 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 AP5B1Q2VPB7 878 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 RFTN2Q52LD8 501 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 RSPO2Q6UXX9 243 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 DBF4BQ8NFT6 615 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 GIPC3Q8TF64 312 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 TANKQ92844 425 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 ACDQ96AP0 544 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 SPATA17Q96L03 361 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 RETREG1Q9H6L5 497 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 GORASP2Q9H8Y8 452 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 FANCEQ9HB96 536 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 SMPD4Q9NXE4 827 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 AGO1Q9UL18 857 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 NEUROG3Q9Y4Z2 214 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 TNPO3Q9Y5L0 923 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 RAI2Q9Y5P3 530 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 COMMD10Q9Y6G5 202 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 MTMR11A4FU01 709 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 OR6C75A6NL08 312 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 IQCF5A8MTL0 148 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 OR7A17O14581 309 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 STX7O15400 261 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 GMNNO75496 209 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 RSL1D1O76021 490 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 F11P03951 625 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 CCNA2P20248 432 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 NFKBIAP25963 317 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 PTGER3P43115 390 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 RPS24P62847 133 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 NFATC3Q12968 1075 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 BNIP3Q12983 259 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 BROXQ5VW32 411 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 XAF1Q6GPH4 301 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 GOLGA7Q7Z5G4 137 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 THAP5Q7Z6K1 395 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 ZDHHC13Q8IUH4 622 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 ABI1Q8IZP0 508 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 OR4F6Q8NGB9 312 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 SNRNP27Q8WVK2 155 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 AURKBQ96GD4 344 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 PDLIM5Q96HC4 596 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 CCDC115Q96NT0 180 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 ADGRE3Q9BY15 652 aa16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 ELAC1Q9H777 363 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-205ENST00000587327 G3V2T6 193 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 HPRP00739 348 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 ZNF182P17025 639 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 UGT1A1P22309 533 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 UGT1A4P22310 534 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 UGT1A3P35503 534 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 UGT1A5P35504 534 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 SLC11A1P49279 550 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 TUBA3CQ13748 450 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 ABRAXAS2Q15018 415 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 KIAA0040Q15053 153 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 MOGQ16653 247 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 TCTN1Q2MV58 587 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 C18orf21Q32NC0 220 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 EFHBQ8N7U6 833 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 ITFG2Q969R8 447 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 CFHR5Q9BXR6 569 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 UGT2B28Q9BY64 529 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 CREBZFQ9NS37 354 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 ZNF510Q9Y2H8 683 aa16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 TDRKHQ9Y2W6 561 aaKnown RBP16.59■□□□□ 0.25
PRKCSH-205ENST00000587327 H7C0S8 307 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 KCNH1O95259 989 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 CNPP09543 421 aaKnown RBP16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 CRHBPP24387 322 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 MAP4P27816 1152 aaKnown RBP16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 C21orf59P57076 290 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 PLIN5Q00G26 463 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 GTF2H2Q13888 395 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 PTPRRQ15256 657 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 RTP2Q5QGT7 225 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 RBM48Q5RL73 367 aaKnown RBP16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 GTF2H2CQ6P1K8 395 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 FRA10AC1Q70Z53 315 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 TAS2R42Q7RTR8 314 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 TET1Q8NFU7 2136 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 OR2T12Q8NG77 320 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 RDH12Q96NR8 316 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 C17orf80Q9BSJ5 609 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 P2RY12Q9H244 342 aa16.58■□□□□ 0.25
PRKCSH-205ENST00000587327 TOR3AQ9H497 397 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms