RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 XRCC1P18887 633 aaPredicted RBP20.11■□□□□ 0.81
SRSF1-206ENST00000583741 CA4P22748 312 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 CCNCP24863 283 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 VPS41P49754 854 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 CLCNKAP51800 687 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 PLA2G4EQ3MJ16 856 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 DUPD1Q68J44 220 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 TIGD7Q6NT04 549 aaPredicted RBP20.11■□□□□ 0.81
SRSF1-206ENST00000583741 CRTC3Q6UUV7 619 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 IFT20Q8IY31 132 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 TEX19Q8NA77 164 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 AVL9Q8NBF6 648 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 FATE1Q969F0 183 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 DPH5Q9H2P9 285 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 ZNF768Q9H5H4 540 aaKnown RBP20.11■□□□□ 0.81
SRSF1-206ENST00000583741 ZNF624Q9P2J8 865 aaPredicted RBP20.11■□□□□ 0.81
SRSF1-206ENST00000583741 SLC23A2Q9UGH3 650 aa20.11■□□□□ 0.81
SRSF1-206ENST00000583741 ESYT3A0FGR9 886 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 ANKRD66B4E2M5 251 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 KIF1CO43896 1103 aaKnown RBP20.1■□□□□ 0.81
SRSF1-206ENST00000583741 MMP2P08253 660 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 ZSCAN5DPP0CG00 497 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 SLC19A1P41440 591 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 P3H1Q32P28 736 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 ASB18Q6ZVZ8 466 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 SEC14L1Q92503 715 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 RSC1A1Q92681 617 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 STAMBPL1Q96FJ0 436 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 PARD6BQ9BYG5 372 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 TLK1Q9UKI8 766 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 POLHQ9Y253 713 aa20.1■□□□□ 0.81
SRSF1-206ENST00000583741 RGSL1A5PLK6 1076 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 BHMG1C9JSJ3 638 aaPredicted RBP20.09■□□□□ 0.81
SRSF1-206ENST00000583741 KCNK1O00180 336 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 KATNA1O75449 491 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 PDGFAP04085 211 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 TUBBP07437 444 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 MCM3P25205 808 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 UQCRFS1P47985 274 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 SEPT7Q16181 437 aaKnown RBP20.09■□□□□ 0.81
SRSF1-206ENST00000583741 FAM182AQ5T1J6 154 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 ALS2CLQ60I27 953 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 HIST2H2BCQ6DN03 193 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 WDR93Q6P2C0 686 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 ATCAYQ86WG3 371 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 RASGRP3Q8IV61 690 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 MLPHQ9BV36 600 aaPredicted RBP20.09■□□□□ 0.81
SRSF1-206ENST00000583741 FAM114A2Q9NRY5 505 aa20.09■□□□□ 0.81
SRSF1-206ENST00000583741 CENPEQ02224 2701 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 CDC14CA4D256 554 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 C5orf60A6NFR6 353 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 CHUKO15111 745 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 TOX3O15405 576 aaPredicted RBP20.08■□□□□ 0.81
SRSF1-206ENST00000583741 RFPL1O75677 317 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 RASSF9O75901 435 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 SLC25A14O95258 325 aaPredicted RBP20.08■□□□□ 0.81
SRSF1-206ENST00000583741 VIPP01282 170 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 RPL22P35268 128 aaKnown RBP20.08■□□□□ 0.81
SRSF1-206ENST00000583741 CD86P42081 329 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 RPL21P46778 160 aaKnown RBP20.08■□□□□ 0.81
SRSF1-206ENST00000583741 DRG2P55039 364 aaKnown RBP20.08■□□□□ 0.81
SRSF1-206ENST00000583741 WASHC5Q12768 1159 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 GPS1Q13098 491 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 GALNT3Q14435 633 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 IL11RAQ14626 422 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 C4orf17Q53FE4 359 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 ADGRG6Q86SQ4 1221 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 GPR26Q8NDV2 337 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 CCDC110Q8TBZ0 833 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 SNF8Q96H20 258 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 SPATA13Q96N96 652 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 SPATA16Q9BXB7 569 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 PAK5Q9P286 719 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 LNPEPQ9UIQ6 1025 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 DNAJC16Q9Y2G8 782 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 SNX24Q9Y343 169 aa20.08■□□□□ 0.81
SRSF1-206ENST00000583741 DNAJB5O75953 348 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 BRAFP15056 766 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 AMD1P17707 334 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 PTPN3P26045 913 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 CAPZBP47756 277 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 PMS2P54278 862 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 VSNL1P62760 191 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 CUL1Q13616 776 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 TRADDQ15628 312 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 INSCQ1MX18 579 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 ANKRD20A2Q5SQ80 823 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 ANKRD20A1Q5TYW2 823 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 ANKRD20A3Q5VUR7 823 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 C4orf22Q6V702 233 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 ARHGEF18Q6ZSZ5 1173 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 PRSS42Q7Z5A4 293 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 TRIM48Q8IWZ4 208 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 IFT81Q8WYA0 676 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 LRRC45Q96CN5 670 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 VAT1Q99536 393 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 CEP41Q9BYV8 373 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 TWSG1Q9GZX9 223 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 TRIM39Q9HCM9 518 aa20.07■□□□□ 0.8
SRSF1-206ENST00000583741 ITPR2Q14571 2701 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms