RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 MCUQ8NE86 351 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 SNIP1Q8TAD8 396 aaKnown RBP18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 RSC1A1Q92681 617 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 NAF1Q96HR8 494 aaKnown RBP18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 SGSM3Q96HU1 749 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 CMKLR1Q99788 373 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 MRM3Q9HC36 420 aaKnown RBP18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 PDP2Q9P2J9 529 aa18.25■□□□□ 0.51
PPP4R1-215ENST00000580182 KLHL33A6NCF5 533 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 GOLGA8KD6RF30 607 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 GOLGA8TH3BQL2 631 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 VAPBO95292 243 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 SLC35G4P0C7Q5 338 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 MLNP12872 115 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 AMD1P17707 334 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 ITGB6P18564 788 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 BRD3Q15059 726 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 RNASEH2BQ5TBB1 312 aaKnown RBP18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 CASC4Q6P4E1 433 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 CERS6Q6ZMG9 384 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 RBM12BQ8IXT5 1001 aaKnown RBP18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 HNRNPLLQ8WVV9 542 aaKnown RBP18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 SLCO2A1Q92959 643 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 DPYSL5Q9BPU6 564 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 OR52A5Q9H2C5 316 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 THSD1Q9NS62 852 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 ASIC3Q9UHC3 531 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 ANAPC5Q9UJX4 755 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 PIKFYVEQ9Y2I7 2098 aa18.24■□□□□ 0.51
PPP4R1-215ENST00000580182 ACACAQ13085 2346 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 IQCF5A8MTL0 148 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 ITGA2BP08514 1039 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 ITPKBP27987 946 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 MAPK10P53779 464 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 ERVPABLB-1P60509 514 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 TRA2AQ13595 282 aaKnown RBP eCLIP18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 C19orf48Q6RUI8 117 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 PPIL6Q8IXY8 311 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 LKAAEAR1Q8TD35 194 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 ELMO1Q92556 727 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 FCRL3Q96P31 734 aaPredicted RBP18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 TTC1Q99614 292 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 EPB41L1Q9H4G0 881 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 VPS37BQ9H9H4 285 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 XAB2Q9HCS7 855 aaKnown RBP18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 OCIAD1Q9NX40 245 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 IL1RAPL1Q9NZN1 696 aa18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 URB1O60287 2271 aaKnown RBP18.23■□□□□ 0.51
PPP4R1-215ENST00000580182 SDR42E2A6NKP2 422 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 DNALI1O14645 258 aaPredicted RBP18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 HGSO14964 777 aaPredicted RBP18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 CAPN5O15484 640 aaPredicted RBP18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 OR56A5P0C7T3 313 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 FGF3P11487 239 aaPredicted RBP18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 IVDP26440 423 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 SLC5A2P31639 672 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 PAFAH1B1P43034 410 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 MAGEA3P43357 314 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 LEPRP48357 1165 aaKnown RBP18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 ARCN1P48444 511 aaKnown RBP18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 PCBP4P57723 403 aaKnown RBP18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 PPP1CAP62136 330 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 SYT10Q6XYQ8 523 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 ARHGAP22Q7Z5H3 698 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 CLEC14AQ86T13 490 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 JAMLQ86YT9 394 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 PHC3Q8NDX5 983 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 USP7Q93009 1102 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 PMEPA1Q969W9 287 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 TMEM159Q96B96 161 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 SIGLEC10Q96LC7 697 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 TGM7Q96PF1 710 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 NRTNQ99748 197 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 TRIM51Q9BSJ1 452 aa18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 MN1Q10571 1320 aaPredicted RBP18.22■□□□□ 0.51
PPP4R1-215ENST00000580182 A0A087WV48 116 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 QSOX1O00391 747 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 PRAMEF10O60809 474 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 C9P02748 559 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 FTH1P02794 183 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 CASQ1P31415 396 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 CSTF2P33240 577 aaKnown RBP eCLIP18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 CAPZBP47756 277 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 CSE1LP55060 971 aaKnown RBP18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 ETF1P62495 437 aaKnown RBP18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 DR1Q01658 176 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 BOP1Q14137 746 aaKnown RBP18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 PLCL1Q15111 1095 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 ANKRD20A4Q4UJ75 823 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 AARS2Q5JTZ9 985 aaKnown RBP18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 IZUMO3Q5VZ72 239 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 KIAA0930Q6ICG6 404 aaPredicted RBP18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 PLXDC1Q8IUK5 500 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 KRT222Q8N1A0 295 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 OTUD6BQ8N6M0 293 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 AGBL5Q8NDL9 886 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 ZNF669Q96BR6 464 aaPredicted RBP18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 AKAP7Q9P0M2 348 aaPredicted RBP18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 SAMD15Q9P1V8 674 aa18.21■□□□□ 0.51
PPP4R1-215ENST00000580182 SLC24A2Q9UI40 661 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms