RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 PPANQ9NQ55 473 aaKnown RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PRMT8Q9NR22 394 aaPredicted RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 ABHD10Q9NUJ1 306 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 DNAJC11Q9NVH1 559 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 RBM28Q9NW13 759 aaKnown RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 TMEM248Q9NWD8 314 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PAG1Q9NWQ8 432 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 TMEM161AQ9NX61 479 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 UPB1Q9UBR1 384 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 DNAJB4Q9UDY4 337 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 SLC24A2Q9UI40 661 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 HACL1Q9UJ83 578 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 GMEB2Q9UKD1 530 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 B3GNT3Q9Y2A9 372 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 CARD8Q9Y2G2 431 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 TMED5Q9Y3A6 229 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 CHD4Q14839 1912 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PCNTO95613 3336 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 KDRP35968 1356 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 DHX29Q7Z478 1369 aaKnown RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 KIDINS220Q9ULH0 1771 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 MIA2Q96PC5 1412 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 GOLGB1Q14789 3259 aaKnown RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 KAT6AQ92794 2004 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CTTNBP2Q8WZ74 1663 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 A0A1W2PR77 199 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 C5orf52A6NGY3 159 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ARHGAP42A6NI28 874 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 NPIPB11E5RHQ5 1161 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 VWA5AO00534 786 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CES2O00748 559 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 KIF1CO43896 1103 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 KIF5CO60282 957 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 HSF2BPO75031 334 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 MED24O75448 989 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 JRKO75564 520 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 AKR7A3O95154 331 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 SLC16A8O95907 504 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TOP3BO95985 862 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 FGBP02675 491 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CYC1P08574 325 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ABHD2P08910 425 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 PRLRP16471 622 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 GNAZP19086 355 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CD27P26842 260 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 EPHB2P29323 1055 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TYK2P29597 1187 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CHRNA3P32297 505 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 SOX6P35712 828 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 FRKP42685 505 aaPredicted RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 PRCPP42785 496 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 KCNJ1P48048 391 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 PITPNBP48739 271 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ZNF75DP51815 510 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ADARP55265 1226 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CDH13P55290 713 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 LINC00205P59089 165 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TRA2BP62995 288 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 SIRPAP78324 504 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CCNA1P78396 465 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 HSD11B2P80365 405 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 SHC2P98077 582 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ELP6Q0PNE2 266 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 HSPB3Q12988 150 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 SNX1Q13596 522 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 DLG2Q15700 870 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 UGCGQ16739 394 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CDO1Q16878 200 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 GLE1Q53GS7 698 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 BOLA3Q53S33 107 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 KCNT1Q5JUK3 1230 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TTC39AQ5SRH9 613 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 C6orf141Q5SZD1 244 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 METRNLQ641Q3 311 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ANGPTL8Q6UXH0 198 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 KYAT3Q6YP21 454 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ZBTB49Q6ZSB9 765 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 MARK2Q7KZI7 788 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 LDB1Q86U70 411 aaPredicted RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TBC1D26Q86UD7 250 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TSPAN33Q86UF1 283 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 DHX40Q8IX18 779 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TMEM132CQ8N3T6 1108 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ZCCHC9Q8N567 271 aaKnown RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 C12orf76Q8N812 135 aaPredicted RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 UXS1Q8NBZ7 420 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 CCNYQ8ND76 341 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 AGBL3Q8NEM8 1001 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 OR56A1Q8NGH5 318 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 OR56B2PQ8NGI1 322 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 OR8K5Q8NH50 307 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 OCC1Q8TAD7 63 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 EXOC6Q8TAG9 804 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 TMEM170AQ8WVE7 144 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 UBLCP1Q8WVY7 318 aaPredicted RBP3.09□□□□□ -1.91
KPNB1-208ENST00000580019 XAGE5Q8WWM1 108 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 GIMAP1Q8WWP7 306 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 ATL1Q8WXF7 558 aa3.09□□□□□ -1.91
KPNB1-208ENST00000580019 SPSB1Q96BD6 273 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms