RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 MRPL17Q9NRX2 175 aaKnown RBP4.85□□□□□ -1.63
IFT20-205ENST00000578009 C20orf96Q9NUD7 363 aaPredicted RBP4.85□□□□□ -1.63
IFT20-205ENST00000578009 TXLNGQ9NUQ3 528 aa4.85□□□□□ -1.63
IFT20-205ENST00000578009 ABCF3Q9NUQ8 709 aa4.85□□□□□ -1.63
IFT20-205ENST00000578009 THAP1Q9NVV9 213 aa4.85□□□□□ -1.63
IFT20-205ENST00000578009 PFDN2Q9UHV9 154 aa4.85□□□□□ -1.63
IFT20-205ENST00000578009 TLK1Q9UKI8 766 aa4.85□□□□□ -1.63
IFT20-205ENST00000578009 FBXO5Q9UKT4 447 aa4.85□□□□□ -1.63
IFT20-205ENST00000578009 CORO1CQ9ULV4 474 aaPredicted RBP4.85□□□□□ -1.63
IFT20-205ENST00000578009 MAGED2Q9UNF1 606 aaPredicted RBP4.85□□□□□ -1.63
IFT20-205ENST00000578009 RPL26L1Q9UNX3 145 aaKnown RBP4.85□□□□□ -1.63
IFT20-205ENST00000578009 ZNF510Q9Y2H8 683 aa4.85□□□□□ -1.63
IFT20-205ENST00000578009 YIPF1Q9Y548 306 aa4.85□□□□□ -1.63
IFT20-205ENST00000578009 PSAT1Q9Y617 370 aa4.85□□□□□ -1.63
IFT20-205ENST00000578009 CAPN7Q9Y6W3 813 aa4.85□□□□□ -1.63
IFT20-205ENST00000578009 TET1Q8NFU7 2136 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 A0A096LPK6 155 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 CCDC189A1A4V9 331 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 TMEM114B3SHH9 223 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 F5H423 210 aaPredicted RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 H0YHG0 523 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 TPP1O14773 563 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 CCDC22O60826 627 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 PMPCBO75439 489 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 RASSF9O75901 435 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 SOAT2O75908 522 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 STC2O76061 302 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 SCAF4O95104 1147 aaKnown RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 UNC5CO95185 931 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 RASGRP1O95267 797 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 VAPBO95292 243 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 FGF19O95750 216 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 NDST3O95803 873 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 MT-CYBP00156 380 aaPredicted RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 AHSGP02765 367 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 KLKB1P03952 638 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 C2P06681 752 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 MMP2P08253 660 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 SERPINF2P08697 491 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 CTSAP10619 480 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 CPA3P15088 417 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 TPH1P17752 444 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 HK1P19367 917 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 BGNP21810 368 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 NMBRP28336 390 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 HOXD9P28356 352 aaPredicted RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 LEPRP48357 1165 aaKnown RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 CLCN5P51795 746 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 KPNA2P52292 529 aaKnown RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 ARFIP2P53365 341 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 KRTAP10-11P60412 298 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 NCALDP61601 193 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 WDR5P61964 334 aaKnown RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 HTRA4P83105 476 aaPredicted RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 TMPRSS15P98073 1019 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 PPARDQ03181 441 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 SLC10A7Q0GE19 358 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 BST1Q10588 318 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 ASPHQ12797 758 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 ZNF177Q13360 481 aaPredicted RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 KRT72Q14CN4 511 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 TBCCQ15814 346 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 CNGA3Q16281 694 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 FASTKD1Q53R41 847 aaKnown RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 INO80DQ53TQ3 878 aaPredicted RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 COLEC12Q5KU26 742 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 SPOUT1Q5T280 376 aaKnown RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 MPP7Q5T2T1 576 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 N4BP2L1Q5TBK1 243 aaPredicted RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 ESRP1Q6NXG1 681 aaKnown RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 CES3Q6UWW8 571 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 CCDC149Q6ZUS6 474 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 ASRGL1Q7L266 308 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 TFAP2DQ7Z6R9 452 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 DNAJB7Q7Z6W7 309 aaPredicted RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 CRLF3Q8IUI8 442 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 WDR75Q8IWA0 830 aaKnown RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 FAM217AQ8IXS0 508 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 C10orf67Q8IYJ2 551 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 KIRREL3Q8IZU9 778 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.84□□□□□ -1.63
IFT20-205ENST00000578009 MAGEC3Q8TD91 643 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 BRSK1Q8TDC3 778 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 ST8SIA2Q92186 375 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 FOXRED1Q96CU9 486 aaPredicted RBP4.84□□□□□ -1.63
IFT20-205ENST00000578009 VPS39Q96JC1 886 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 RMDN2Q96LZ7 410 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 TSNARE1Q96NA8 513 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 TRIB3Q96RU7 358 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 FOXB1Q99853 325 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 APOL2Q9BQE5 337 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 MGME1Q9BQP7 344 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 SLC13A1Q9BZW2 595 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 NACA2Q9H009 215 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 WWP1Q9H0M0 922 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 C11orf49Q9H6J7 331 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 TLE6Q9H808 572 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 KCNK13Q9HB14 408 aa4.84□□□□□ -1.63
IFT20-205ENST00000578009 ARHGEF3Q9NR81 526 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms