RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 COMMD10Q9Y6G5 202 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 PRSS21Q9Y6M0 314 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 COLEC10Q9Y6Z7 277 aa12.51□□□□□ -0.41
TRAPPC1-206ENST00000573989 ESPNB1AK53 854 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 E5RI56 91 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 TMX2-CTNND1H3BSU7 103 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 PPM1DO15297 605 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 HYAL3O43820 417 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 EML2O95834 649 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 RPLP0P05388 317 aaKnown RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 APOA4P06727 396 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 FMO4P31512 558 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 SLC19A1P41440 591 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 CD151P48509 253 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 EPHA4P54764 986 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 INSM1Q01101 510 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 BOP1Q14137 746 aaKnown RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 FRG1Q14331 258 aaKnown RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 CLCA4Q14CN2 919 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 STEAP4Q687X5 459 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 UNC5AQ6ZN44 842 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 RBM44Q6ZP01 1051 aaKnown RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 FAM83HQ6ZRV2 1179 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 KIAA0408Q6ZU52 694 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 MICALCLQ6ZW33 695 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 SPRED1Q7Z699 444 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 CCDC25Q86WR0 208 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 ANKMY2Q8IV38 441 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 SFTPA2Q8IWL1 248 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 NOA1Q8NC60 698 aaKnown RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 OR10G6Q8NH81 332 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 FBXO25Q8TCJ0 367 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 ZFPM2Q8WW38 1151 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 SEC14L1Q92503 715 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 LPGAT1Q92604 370 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 GRAMD1AQ96CP6 724 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 C12orf66Q96MD2 445 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 PWWP2AQ96N64 755 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 WWP1Q9H0M0 922 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 P2RY12Q9H244 342 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 IARS2Q9NSE4 1012 aaKnown RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 IMP3Q9NV31 184 aaKnown RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 IL1RAPL1Q9NZN1 696 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 SCHIP1Q9P0W5 487 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 FBXO5Q9UKT4 447 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 ANGPTL2Q9UKU9 493 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 CRYL1Q9Y2S2 319 aa12.5□□□□□ -0.41
TRAPPC1-206ENST00000573989 ESYT3A0FGR9 886 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 LILRA5A6NI73 299 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 OR52A4PA6NMU1 304 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 DUX1O43812 170 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 CPNE6O95741 557 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 S1PR4O95977 384 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 MT-CO3P00414 261 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 GSTA2P09210 222 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 ERVK-10P10266 1014 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 MTHFD1P11586 935 aaKnown RBP12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 PKMP14618 531 aaKnown RBP12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 BRAFP15056 766 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 CHRM3P20309 590 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 SLC1A2P43004 574 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 LEPRP48357 1165 aaKnown RBP12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 UBE2IP63279 158 aaKnown RBP12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 CCL7P80098 99 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 ILF2Q12905 390 aaKnown RBP12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 CTBP1Q13363 440 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 RPE65Q16518 533 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 AMZ1Q400G9 498 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 KLHL35Q6PF15 583 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 TMEM26Q6ZUK4 368 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 OTOAQ7RTW8 1153 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 PIM3Q86V86 326 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 IGDCC3Q8IVU1 814 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 DENND6AQ8IWF6 608 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 CDKL2Q92772 493 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 SCNM1Q9BWG6 230 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 NSMCE4AQ9NXX6 385 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 ZFATQ9P243 1243 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 ZNF624Q9P2J8 865 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 RABGEF1Q9UJ41 708 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 WDR37Q9Y2I8 494 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 NEUROG3Q9Y4Z2 214 aa12.49□□□□□ -0.41
TRAPPC1-206ENST00000573989 MED19A0JLT2 244 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 SLC5A10A0PJK1 596 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 NTN3O00634 580 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 KDM1AO60341 852 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 SPAG6O75602 509 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 RPN2P04844 631 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 ITGB6P18564 788 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 CARSP49589 748 aaKnown RBP12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 OR1D5P58170 312 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 TUBB4BP68371 445 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 SHC2P98077 582 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 MGAT5Q09328 741 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 HSPA14Q0VDF9 509 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 CUL1Q13616 776 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 BRD3Q15059 726 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 PLCL1Q15111 1095 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 MAP9Q49MG5 647 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms