RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 RAB15P59190 212 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 KIAA0040Q15053 153 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 SKIV2LQ15477 1246 aaKnown RBP18.78■□□□□ 0.6
SCARF1-206ENST00000573852 ZRANB3Q5FWF4 1079 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 GOLGA7Q7Z5G4 137 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 CHDHQ8NE62 594 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-206ENST00000573852 AURKBQ96GD4 344 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-206ENST00000573852 OLA1Q9NTK5 396 aaKnown RBP18.78■□□□□ 0.6
SCARF1-206ENST00000573852 PRG3Q9Y2Y8 225 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-206ENST00000573852 PCDHGC4Q9Y5F7 938 aa18.78■□□□□ 0.6
SCARF1-206ENST00000573852 C1orf232A0A0U1RR37 186 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 HPRP00739 348 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 IGHA2P01877 340 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 TTPAP49638 278 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 NR1D2Q14995 579 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 CTU2Q2VPK5 515 aaKnown RBP18.77■□□□□ 0.6
SCARF1-206ENST00000573852 NAT16Q8N8M0 369 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 TRUB1Q8WWH5 349 aaKnown RBP18.77■□□□□ 0.6
SCARF1-206ENST00000573852 HDAC2Q92769 488 aaKnown RBP18.77■□□□□ 0.6
SCARF1-206ENST00000573852 NRBF2Q96F24 287 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 IKZF5Q9H5V7 419 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 TLR8Q9NR97 1041 aaKnown RBP18.77■□□□□ 0.6
SCARF1-206ENST00000573852 NOD1Q9Y239 953 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 CLPXO76031 633 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 RELAQ04206 551 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 PPP1R8Q12972 351 aaKnown RBP18.77■□□□□ 0.6
SCARF1-206ENST00000573852 CBX3Q13185 183 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 C6orf141Q5SZD1 244 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 EFHBQ8N7U6 833 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 OR2T12Q8NG77 320 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 OR8J3Q8NGG0 315 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 CHPT1Q8WUD6 406 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 OSBPL10Q9BXB5 764 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 TDRD1Q9BXT4 1180 aaKnown RBP18.77■□□□□ 0.6
SCARF1-206ENST00000573852 GORASP2Q9H8Y8 452 aa18.77■□□□□ 0.6
SCARF1-206ENST00000573852 UBA2Q9UBT2 640 aaPredicted RBP18.77■□□□□ 0.6
SCARF1-206ENST00000573852 E5RI56 91 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 F5H5T6 163 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 SULT1C4O75897 302 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 CST1P01037 141 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 PORP16435 677 aaPredicted RBP18.77■□□□□ 0.59
SCARF1-206ENST00000573852 CR2P20023 1033 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 OR1G1P47890 313 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 ARPP19P56211 112 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 VARS2Q5ST30 1063 aaKnown RBP18.77■□□□□ 0.59
SCARF1-206ENST00000573852 TTC23Q5W5X9 447 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 LAIR2Q6ISS4 152 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 NECAB2Q7Z6G3 386 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 RBM23Q86U06 439 aaKnown RBP18.77■□□□□ 0.59
SCARF1-206ENST00000573852 ZBTB8BQ8NAP8 495 aaPredicted RBP18.77■□□□□ 0.59
SCARF1-206ENST00000573852 OR10A6Q8NH74 314 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 KCNJ9Q92806 393 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 FKBP10Q96AY3 582 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 CCDC115Q96NT0 180 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 UGT2B28Q9BY64 529 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 DNAJB9Q9UBS3 223 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 LIMD1Q9UGP4 676 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 ADGRE2Q9UHX3 823 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 GNPTGQ9UJJ9 305 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 VPS9D1Q9Y2B5 631 aa18.77■□□□□ 0.59
SCARF1-206ENST00000573852 SOBPA7XYQ1 873 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 GMNNO75496 209 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 CD9P21926 228 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 NR4A1P22736 598 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 JAK1P23458 1154 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 PPP2R2BQ00005 443 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 RING1Q06587 406 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 PTGR1Q14914 329 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 SPCS2Q15005 226 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 ZNF548Q8NEK5 533 aaPredicted RBP18.76■□□□□ 0.59
SCARF1-206ENST00000573852 BEGAINQ9BUH8 593 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 MAGEH1Q9H213 219 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 SCUBE2Q9NQ36 999 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 NUDT4Q9NZJ9 180 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 ZMYM5Q9UJ78 669 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 GSTA4O15217 222 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 AGXTP21549 392 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 MAGEA11P43364 429 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 CLCN7P51798 805 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 AQP6Q13520 282 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 GTF2H2Q13888 395 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 DPY19L1Q2PZI1 675 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 GTF2H2CQ6P1K8 395 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 TTC16Q8NEE8 873 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 SDCCAG3Q96C92 435 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 THUMPD3Q9BV44 507 aaKnown RBP18.76■□□□□ 0.59
SCARF1-206ENST00000573852 FUNDC2Q9BWH2 189 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 CRISPLD1Q9H336 500 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 PALMDQ9NP74 551 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 SELENONQ9NZV5 590 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 PDE10AQ9Y233 779 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 CCL27Q9Y4X3 112 aa18.76■□□□□ 0.59
SCARF1-206ENST00000573852 ZFP37Q9Y6Q3 630 aaPredicted RBP18.76■□□□□ 0.59
SCARF1-206ENST00000573852 IFRD1O00458 451 aaPredicted RBP18.75■□□□□ 0.59
SCARF1-206ENST00000573852 SLC2A4P14672 509 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 BCAP31P51572 246 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 TPD52P55327 224 aaPredicted RBP18.75■□□□□ 0.59
SCARF1-206ENST00000573852 PHEXP78562 749 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 CD47Q08722 323 aa18.75■□□□□ 0.59
SCARF1-206ENST00000573852 KCNAB2Q13303 367 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms