RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 SLC2A4P14672 509 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 CD9P21926 228 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 UGT1A1P22309 533 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 UGT1A4P22310 534 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 NFKBIAP25963 317 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 UGT1A3P35503 534 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 UGT1A5P35504 534 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 CAPGP40121 348 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 ESRRGP62508 458 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 HPCAP84074 193 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 SEMG2Q02383 582 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 TRAF3Q13114 568 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 PCBP2Q15366 365 aaKnown RBP eCLIP11.04□□□□□ -0.64
RPAIN-212ENST00000573126 PHKG1Q16816 387 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 SGO1Q5FBB7 561 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 MILR1Q7Z6M3 343 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 ERI1Q8IV48 349 aaKnown RBP11.04□□□□□ -0.64
RPAIN-212ENST00000573126 GAB3Q8WWW8 586 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 ISOC1Q96CN7 298 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 ASB8Q9H765 288 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 VAPAQ9P0L0 249 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 TNPO3Q9Y5L0 923 aaKnown RBP11.04□□□□□ -0.64
RPAIN-212ENST00000573126 ST14Q9Y5Y6 855 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 GBF1Q92538 1859 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 KANSL1LA0AUZ9 987 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 TMX2-CTNND1H3BSU7 103 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 SMAD6O43541 496 aaKnown RBP11.04□□□□□ -0.64
RPAIN-212ENST00000573126 FZD6O60353 706 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 DFNA5O60443 496 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 SLC25A14O95258 325 aaPredicted RBP11.04□□□□□ -0.64
RPAIN-212ENST00000573126 OTCP00480 354 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 UMPSP11172 480 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 CSKP41240 450 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 ALDH7A1P49419 539 aaKnown RBP11.04□□□□□ -0.64
RPAIN-212ENST00000573126 SMAD3P84022 425 aaKnown RBP11.04□□□□□ -0.64
RPAIN-212ENST00000573126 CDH18Q13634 790 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 ARMC12Q5T9G4 340 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 ABRAXAS1Q6UWZ7 409 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 ALDH16A1Q8IZ83 802 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 DPP10Q8N608 796 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 FAM86B1Q8N7N1 296 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 PAPD5Q8NDF8 572 aaKnown RBP11.04□□□□□ -0.64
RPAIN-212ENST00000573126 FIG4Q92562 907 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 MYO19Q96H55 970 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 VN1R3Q9BXE9 311 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 SEZ6LQ9BYH1 1024 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 TIMMDC1Q9NPL8 285 aa11.04□□□□□ -0.64
RPAIN-212ENST00000573126 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-212ENST00000573126 GAPDHSO14556 408 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-212ENST00000573126 RAD51BO15315 384 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 TAPBPO15533 448 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 B4GAT1O43505 415 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 MBL2P11226 248 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-212ENST00000573126 TCF3P15923 654 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 ZNF7P17097 686 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-212ENST00000573126 SP3Q02447 781 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 FAM174BQ3ZCQ3 159 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 MBOAT1Q6ZNC8 495 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 PATL1Q86TB9 770 aaKnown RBP11.03□□□□□ -0.64
RPAIN-212ENST00000573126 PROSER1Q86XN7 944 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 ITFG1Q8TB96 612 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 OSCP1Q8WVF1 389 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 SCLYQ96I15 445 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 CLSTN3Q9BQT9 956 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 BDH2Q9BUT1 245 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-212ENST00000573126 ABCG8Q9H221 673 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 RETREG1Q9H6L5 497 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 NTN4Q9HB63 628 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 CD320Q9NPF0 282 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 MTRRQ9UBK8 725 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 KLQ9UEF7 1012 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 MAGEL2Q9UJ55 1249 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 PTBP2Q9UKA9 531 aaKnown RBP11.03□□□□□ -0.64
RPAIN-212ENST00000573126 TMCO1Q9UM00 188 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 NEUROG3Q9Y4Z2 214 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 ANGPTL3Q9Y5C1 460 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 PDE4DIPQ5VU43 2346 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 ARVCFO00192 962 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 CLDN7O95471 211 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 STT3AP46977 705 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 IST1P53990 364 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 ZXDBP98169 803 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 PMS2P3Q13401 168 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 NFATC2Q13469 925 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 FXNQ16595 210 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 CLHC1Q8NHS4 586 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 BPIFB1Q8TDL5 484 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 PIH1D2Q8WWB5 315 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 C12orf43Q96C57 262 aaKnown RBP11.03□□□□□ -0.64
RPAIN-212ENST00000573126 PDLIM5Q96HC4 596 aaKnown RBP11.03□□□□□ -0.64
RPAIN-212ENST00000573126 TBCDQ9BTW9 1192 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 THUMPD3Q9BV44 507 aaKnown RBP11.03□□□□□ -0.64
RPAIN-212ENST00000573126 NPLQ9BXD5 320 aaPredicted RBP11.03□□□□□ -0.64
RPAIN-212ENST00000573126 IKZF5Q9H5V7 419 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 ZFYVE1Q9HBF4 777 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 MAGEE1Q9HCI5 957 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 IL26Q9NPH9 171 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 LATS2Q9NRM7 1088 aa11.03□□□□□ -0.64
RPAIN-212ENST00000573126 WWOXQ9NZC7 414 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms