RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 BLOC1S3Q6QNY0 202 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 LARP4Q71RC2 724 aaKnown RBP eCLIP10.76□□□□□ -0.69
PALB2-206ENST00000568219 SPATA19Q7Z5L4 167 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 CLEC14AQ86T13 490 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 SH3BP4Q9P0V3 963 aa10.76□□□□□ -0.69
PALB2-206ENST00000568219 SMIM28A0A1B0GU29 152 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 H3BN98 237 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 HSD17B1P14061 328 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 ATF4P18848 351 aaPredicted RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 CD40LGP29965 261 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 SRP54P61011 504 aaKnown RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 SELENBP1Q13228 472 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 DCAF4L1Q3SXM0 396 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 ZNF484Q5JVG2 852 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 ERAP2Q6P179 960 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 GLT6D1Q7Z4J2 308 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 FAM83FQ8NEG4 500 aaPredicted RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 OR4K2Q8NGD2 314 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 TMEM174Q8WUU8 243 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 TMEM125Q96AQ2 219 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 VRTNQ9H8Y1 702 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 FBXW11Q9UKB1 542 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 UGT2B11O75310 529 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 LGALS2P05162 132 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 SERPINF2P08697 491 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 PRSS56P0CW18 603 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 PIGAP37287 484 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 HSPA7P48741 367 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 ARSDP51689 593 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 PLEKHG6Q3KR16 790 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 CYP20A1Q6UW02 462 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 ZNF517Q6ZMY9 492 aaPredicted RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 TAC4Q86UU9 113 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 TCAIMQ8N3R3 496 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 TMEM132CQ8N3T6 1108 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 CELF2-AS1Q8N7Q2 184 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 CHDHQ8NE62 594 aaPredicted RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 GPR152Q8TDT2 470 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 NECTIN4Q96NY8 510 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 ZNF717Q9BY31 904 aaPredicted RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 ENPP5Q9UJA9 477 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 TESMINQ9Y4I5 508 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 DOCK2Q92608 1830 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 PIPSLA2A3N6 862 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 UBFD1O14562 309 aaKnown RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 RFXANKO14593 260 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 NUAK1O60285 661 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 POMCP01189 267 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 MYL3P08590 195 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 PCSK1P29120 753 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 LEPRP48357 1165 aaKnown RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 PAFAH1B3Q15102 231 aaKnown RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 GRIK4Q16099 956 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 RFX4Q33E94 735 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 ADPRMQ3LIE5 342 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 ZC3H12BQ5HYM0 836 aaKnown RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 C10orf120Q5SQS8 335 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 PLET1Q6UQ28 207 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 FAM217AQ8IXS0 508 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 ST13P5Q8NFI4 369 aaPredicted RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 LILRB4Q8NHJ6 448 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 SLC13A3Q8WWT9 602 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 TMEM203Q969S6 136 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 TEX37Q96LM6 180 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 PANX1Q96RD7 426 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 TDRD1Q9BXT4 1180 aaKnown RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 HDHD2Q9H0R4 259 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 CXCL16Q9H2A7 254 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 RNF39Q9H2S5 420 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 GSTO2Q9H4Y5 243 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 SPATA2Q9UM82 520 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 GPSM3Q9Y4H4 160 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 MYO10Q9HD67 2058 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 ITGBL1O95965 494 aaPredicted RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 VIPP01282 170 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 TCF3P15923 654 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 GDF5P43026 501 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 CTSKP43235 329 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 FAM189BP81408 668 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 HIST2H2ACQ16777 129 aaPredicted RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 KIAA0930Q6ICG6 404 aaPredicted RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 CATSPERGQ6ZRH7 1159 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 CCDC149Q6ZUS6 474 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 ISCA2Q86U28 154 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 CIR1Q86X95 450 aaPredicted RBP10.75□□□□□ -0.69
PALB2-206ENST00000568219 GPR65Q8IYL9 337 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 SLC34A3Q8N130 599 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 OR6J1Q8NGC5 347 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 SCAMP5Q8TAC9 235 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.69
PALB2-206ENST00000568219 UBE2FQ969M7 185 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 TMEM209Q96SK2 561 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 IPPKQ9H8X2 491 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 TMLHEQ9NVH6 421 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 CDH7Q9ULB5 785 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 RNF6Q9Y252 685 aa10.75□□□□□ -0.69
PALB2-206ENST00000568219 NAV1Q8NEY1 1877 aa10.74□□□□□ -0.69
PALB2-206ENST00000568219 MYH14Q7Z406 1995 aaKnown RBP10.74□□□□□ -0.69
PALB2-206ENST00000568219 M0QX08 132 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms