RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 KYNUQ16719 465 aa15.08■□□□□ 0
PALB2-205ENST00000567003 PLEKHN1Q494U1 663 aaPredicted RBP15.08■□□□□ 0
PALB2-205ENST00000567003 FIGNQ5HY92 759 aa15.08■□□□□ 0
PALB2-205ENST00000567003 FNBP1LQ5T0N5 605 aa15.08■□□□□ 0
PALB2-205ENST00000567003 TMTC4Q5T4D3 741 aa15.08■□□□□ 0
PALB2-205ENST00000567003 SLC9A4Q6AI14 798 aa15.08■□□□□ 0
PALB2-205ENST00000567003 CCDC70Q6NSX1 233 aa15.08■□□□□ 0
PALB2-205ENST00000567003 ARMC6Q6NXE6 501 aa15.08■□□□□ 0
PALB2-205ENST00000567003 RHOT1Q8IXI2 618 aa15.08■□□□□ 0
PALB2-205ENST00000567003 SYTL1Q8IYJ3 562 aa15.08■□□□□ 0
PALB2-205ENST00000567003 CISD2Q8N5K1 135 aaKnown RBP15.08■□□□□ 0
PALB2-205ENST00000567003 BRSK1Q8TDC3 778 aa15.08■□□□□ 0
PALB2-205ENST00000567003 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.08■□□□□ 0
PALB2-205ENST00000567003 SNRNP40Q96DI7 357 aaKnown RBP15.08■□□□□ 0
PALB2-205ENST00000567003 RMDN2Q96LZ7 410 aa15.08■□□□□ 0
PALB2-205ENST00000567003 PCMTD2Q9NV79 361 aa15.08■□□□□ 0
PALB2-205ENST00000567003 ASF1BQ9NVP2 202 aa15.08■□□□□ 0
PALB2-205ENST00000567003 SLC24A2Q9UI40 661 aa15.08■□□□□ 0
PALB2-205ENST00000567003 PCDHGB7Q9Y5F8 929 aa15.08■□□□□ 0
PALB2-205ENST00000567003 BZW2Q9Y6E2 419 aaKnown RBP15.08■□□□□ 0
PALB2-205ENST00000567003 MDC1Q14676 2089 aaKnown RBP15.08■□□□□ 0
PALB2-205ENST00000567003 A0A0A6YYK5 440 aaPredicted RBP15.07■□□□□ 0
PALB2-205ENST00000567003 TMEM150CB9EJG8 249 aa15.07■□□□□ 0
PALB2-205ENST00000567003 MASP2O00187 686 aa15.07■□□□□ 0
PALB2-205ENST00000567003 APOL1O14791 398 aa15.07■□□□□ 0
PALB2-205ENST00000567003 KCNJ13O60928 360 aa15.07■□□□□ 0
PALB2-205ENST00000567003 SERPINC1P01008 464 aa15.07■□□□□ 0
PALB2-205ENST00000567003 RAB40ALP0C0E4 278 aa15.07■□□□□ 0
PALB2-205ENST00000567003 HLA-DPA1P20036 260 aa15.07■□□□□ 0
PALB2-205ENST00000567003 PTPN3P26045 913 aa15.07■□□□□ 0
PALB2-205ENST00000567003 AKT1P31749 480 aa15.07■□□□□ 0
PALB2-205ENST00000567003 CD68P34810 354 aaPredicted RBP15.07■□□□□ 0
PALB2-205ENST00000567003 HMGCLP35914 325 aa15.07■□□□□ 0
PALB2-205ENST00000567003 WNT3AP56704 352 aa15.07■□□□□ 0
PALB2-205ENST00000567003 GSDMDP57764 484 aa15.07■□□□□ 0
PALB2-205ENST00000567003 MESDQ14696 234 aa15.07■□□□□ 0
PALB2-205ENST00000567003 PDK1Q15118 436 aa15.07■□□□□ 0
PALB2-205ENST00000567003 ZNF789Q5FWF6 425 aa15.07■□□□□ 0
PALB2-205ENST00000567003 SIRPB2Q5JXA9 342 aa15.07■□□□□ 0
PALB2-205ENST00000567003 LDLRAP1Q5SW96 308 aa15.07■□□□□ 0
PALB2-205ENST00000567003 METRNLQ641Q3 311 aa15.07■□□□□ 0
PALB2-205ENST00000567003 KDELC1Q6UW63 502 aa15.07■□□□□ 0
PALB2-205ENST00000567003 RFX6Q8HWS3 928 aa15.07■□□□□ 0
PALB2-205ENST00000567003 LILRA3Q8N6C8 439 aaPredicted RBP15.07■□□□□ 0
PALB2-205ENST00000567003 GLIS1Q8NBF1 620 aa15.07■□□□□ 0
PALB2-205ENST00000567003 DDHD1Q8NEL9 900 aa15.07■□□□□ 0
PALB2-205ENST00000567003 OR4E2Q8NGC2 313 aa15.07■□□□□ 0
PALB2-205ENST00000567003 BLOC1S5Q8TDH9 187 aa15.07■□□□□ 0
PALB2-205ENST00000567003 CPT1BQ92523 772 aa15.07■□□□□ 0
PALB2-205ENST00000567003 SYN2Q92777 582 aaPredicted RBP15.07■□□□□ 0
PALB2-205ENST00000567003 RANBP9Q96S59 729 aa15.07■□□□□ 0
PALB2-205ENST00000567003 BPIFA3Q9BQP9 254 aa15.07■□□□□ 0
PALB2-205ENST00000567003 NLNQ9BYT8 704 aa15.07■□□□□ 0
PALB2-205ENST00000567003 ZCCHC2Q9C0B9 1178 aaKnown RBP15.07■□□□□ 0
PALB2-205ENST00000567003 NAT10Q9H0A0 1025 aaKnown RBP15.07■□□□□ 0
PALB2-205ENST00000567003 KLHL25Q9H0H3 589 aa15.07■□□□□ 0
PALB2-205ENST00000567003 LATS2Q9NRM7 1088 aa15.07■□□□□ 0
PALB2-205ENST00000567003 IL17CQ9P0M4 197 aa15.07■□□□□ 0
PALB2-205ENST00000567003 TMEM63CQ9P1W3 806 aa15.07■□□□□ 0
PALB2-205ENST00000567003 BTRCQ9Y297 605 aa15.07■□□□□ 0
PALB2-205ENST00000567003 DIDO1Q9BTC0 2240 aaKnown RBP15.07■□□□□ 0
PALB2-205ENST00000567003 CROCCQ5TZA2 2017 aa15.06■□□□□ 0
PALB2-205ENST00000567003 GLYATL1P3A0A0U1RQE8 302 aa15.06■□□□□ 0
PALB2-205ENST00000567003 A0A1W2PQJ5 194 aa15.06■□□□□ 0
PALB2-205ENST00000567003 WIPF3A6NGB9 483 aa15.06■□□□□ 0
PALB2-205ENST00000567003 SMTNL1A8MU46 457 aa15.06■□□□□ 0
PALB2-205ENST00000567003 PPP1R12AO14974 1030 aaPredicted RBP15.06■□□□□ 0
PALB2-205ENST00000567003 KRT1P04264 644 aa15.06■□□□□ 0
PALB2-205ENST00000567003 NFKB1P19838 968 aa15.06■□□□□ 0
PALB2-205ENST00000567003 CDH3P22223 829 aa15.06■□□□□ 0
PALB2-205ENST00000567003 OTX2P32243 289 aa15.06■□□□□ 0
PALB2-205ENST00000567003 LMAN1P49257 510 aa15.06■□□□□ 0
PALB2-205ENST00000567003 FOXL2P58012 376 aa15.06■□□□□ 0
PALB2-205ENST00000567003 SLC14A2Q15849 920 aa15.06■□□□□ 0
PALB2-205ENST00000567003 TEX44Q53QW1 395 aa15.06■□□□□ 0
PALB2-205ENST00000567003 DAAM2Q86T65 1068 aa15.06■□□□□ 0
PALB2-205ENST00000567003 OR8K5Q8NH50 307 aa15.06■□□□□ 0
PALB2-205ENST00000567003 LRFN5Q96NI6 719 aa15.06■□□□□ 0
PALB2-205ENST00000567003 SMAD5Q99717 465 aaKnown RBP15.06■□□□□ 0
PALB2-205ENST00000567003 KIR3DX1Q9H7L2 352 aa15.06■□□□□ 0
PALB2-205ENST00000567003 ACTR5Q9H9F9 607 aaPredicted RBP15.06■□□□□ 0
PALB2-205ENST00000567003 FANCEQ9HB96 536 aa15.06■□□□□ 0
PALB2-205ENST00000567003 SAE1Q9UBE0 346 aaPredicted RBP15.06■□□□□ 0
PALB2-205ENST00000567003 POMT2Q9UKY4 750 aa15.06■□□□□ 0
PALB2-205ENST00000567003 G3BP2Q9UN86 482 aaKnown RBP15.06■□□□□ 0
PALB2-205ENST00000567003 ANKRD17O75179 2603 aaKnown RBP15.05■□□□□ 0
PALB2-205ENST00000567003 GSAPA4D1B5 854 aa15.05■□□□□ -0
PALB2-205ENST00000567003 CBX6O95503 412 aa15.05■□□□□ -0
PALB2-205ENST00000567003 POLBP06746 335 aa15.05■□□□□ -0
PALB2-205ENST00000567003 PVRP15151 417 aa15.05■□□□□ -0
PALB2-205ENST00000567003 ST6GAL1P15907 406 aa15.05■□□□□ -0
PALB2-205ENST00000567003 MSH3P20585 1137 aa15.05■□□□□ -0
PALB2-205ENST00000567003 CYP2A7P20853 494 aa15.05■□□□□ -0
PALB2-205ENST00000567003 PBX1P40424 430 aa15.05■□□□□ -0
PALB2-205ENST00000567003 NCF4Q15080 339 aa15.05■□□□□ -0
PALB2-205ENST00000567003 LLGL1Q15334 1064 aa15.05■□□□□ -0
PALB2-205ENST00000567003 MICALCLQ6ZW33 695 aa15.05■□□□□ -0
PALB2-205ENST00000567003 GLT6D1Q7Z4J2 308 aa15.05■□□□□ -0
PALB2-205ENST00000567003 TMEM151BQ8IW70 566 aa15.05■□□□□ -0
PALB2-205ENST00000567003 SRRM1Q8IYB3 904 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms