RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 AGBL2Q5U5Z8 902 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 MIS18BP1Q6P0N0 1132 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 WDR5BQ86VZ2 330 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 ADGRG3Q86Y34 549 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 ARMC8Q8IUR7 673 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 SRBD1Q8N5C6 995 aaKnown RBP4.24□□□□□ -1.73
LINC00561-201ENST00000565815 ADPRHL1Q8NDY3 354 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 BCAS4Q8TDM0 211 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 HASPINQ8TF76 798 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 CABS1Q96KC9 395 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 NR1H4Q96RI1 486 aaPredicted RBP4.24□□□□□ -1.73
LINC00561-201ENST00000565815 SPZ1Q9BXG8 430 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 TRIM9Q9C026 710 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 C20orf141Q9NUB4 165 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 BEX4Q9NWD9 120 aaPredicted RBP4.24□□□□□ -1.73
LINC00561-201ENST00000565815 BARHL2Q9NY43 387 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 MRPL11Q9Y3B7 192 aaKnown RBP4.24□□□□□ -1.73
LINC00561-201ENST00000565815 TECTAO75443 2155 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 HTTP42858 3142 aa4.24□□□□□ -1.73
LINC00561-201ENST00000565815 TRBV5-7A0A0A0MS05 114 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 CCDC188H7C350 402 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 PRKAB2O43741 272 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 PLEKHA8P1O95397 391 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 SERPING1P05155 500 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 GALTP07902 379 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 PAEPP09466 180 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 HSPA9P38646 679 aaKnown RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 MAGEA1P43355 309 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ARSFP54793 590 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 VAMP2P63027 116 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 PTP4A2Q12974 167 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 MAPRE1Q15691 268 aaKnown RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 TMEM266Q2M3C6 531 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 SMTNL2Q2TAL5 461 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 COL28A1Q2UY09 1125 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 SLC18B1Q6NT16 456 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 PDXDC1Q6P996 788 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 IQCKQ8N0W5 287 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 NME8Q8N427 588 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 OTUD6BQ8N6M0 293 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 SDR42E1Q8WUS8 393 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ATP6V0A1Q93050 837 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 IFT27Q9BW83 186 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ITPAQ9BY32 194 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 FAM129AQ9BZQ8 928 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 GLT8D2Q9H1C3 349 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 BLZF1Q9H2G9 400 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 CNOT10Q9H9A5 744 aaKnown RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 C6orf50Q9HD87 102 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 WDR6Q9NNW5 1121 aaKnown RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 PSAT1Q9Y617 370 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 TEX13CA0A0J9YWL9 993 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 SAC3D1A6NKF1 404 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 M0QZ92 97 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 NDUFAB1O14561 156 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 CHUKO15111 745 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 FAM107AO95990 144 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 CIITAP33076 1130 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 NRIP1P48552 1158 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 EIF3BP55884 814 aaKnown RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ASIC1P78348 528 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 GHRHRQ02643 423 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 PMPCAQ10713 525 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 NEDD9Q14511 834 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 IL17AQ16552 155 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 BAK1Q16611 211 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ASTE1Q2TB18 679 aaPredicted RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 EARS2Q5JPH6 523 aaKnown RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 FAM205BPQ63HN1 556 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 TMEM71Q6P5X7 295 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ZNF793Q6ZN11 406 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 CPXM2Q8N436 756 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 HORMAD2Q8N7B1 307 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 HDAC2Q92769 488 aaKnown RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ATP6V1G3Q96LB4 118 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ZMYND12Q9H0C1 365 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 NDST4Q9H3R1 872 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 SLITRK6Q9H5Y7 841 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 SPAG4Q9NPE6 437 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 GMEB2Q9UKD1 530 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 DUSP12Q9UNI6 340 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ZFP37Q9Y6Q3 630 aaPredicted RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 CAPN7Q9Y6W3 813 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 NRCAMQ92823 1304 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 KDM3AQ9Y4C1 1321 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 OR6C68A6NDL8 312 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 CBY3A6NI87 242 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 TEX22C9J3V5 150 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 SLC30A4O14863 429 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 RNASEH2AO75792 299 aaKnown RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 RNF8O76064 485 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 GHRP10912 638 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 GCFC2P16383 781 aaKnown RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 POLGP54098 1239 aaPredicted RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 SLC18A2Q05940 514 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 TMEM115Q12893 351 aaPredicted RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 CAPSQ13938 189 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 KCNC3Q14003 757 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 SLMAPQ14BN4 828 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 NAB2Q15742 525 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms