RNA–Protein interactions for RNA: ENST00000565309.1

TRAPPC2L-210, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 699 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-210ENST00000565309 SLC1A2P43004 574 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 GPR3P46089 330 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 PREPP48147 710 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 UBE2IP63279 158 aaKnown RBP12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 BOP1Q14137 746 aaKnown RBP12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 RPE65Q16518 533 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 STEAP4Q687X5 459 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 ZNF449Q6P9G9 518 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 TRMT10BQ6PF06 316 aaKnown RBP12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 NAPRTQ6XQN6 538 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 TMPRSS7Q7RTY8 843 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 SPRED1Q7Z699 444 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CCDC25Q86WR0 208 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 TMPRSS12Q86WS5 348 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 MARCH9Q86YJ5 346 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 LMNTD2Q8IXW0 634 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 KRT222Q8N1A0 295 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 GALNT15Q8N3T1 639 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 AVL9Q8NBF6 648 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 LKAAEAR1Q8TD35 194 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 PYROXD1Q8WU10 500 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CXorf40BQ96DE9 158 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CERS2Q96G23 380 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 C12orf66Q96MD2 445 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 BIRC8Q96P09 236 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 INSM2Q96T92 566 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 SLC38A3Q99624 504 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 FAM167BQ9BTA0 163 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 SCNM1Q9BWG6 230 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 TSSK1BQ9BXA7 367 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 LRRN3Q9H3W5 708 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 PPANQ9NQ55 473 aaKnown RBP12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 FBXO6Q9NRD1 293 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 INTS10Q9NVR2 710 aaKnown RBP12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 GNPTGQ9UJJ9 305 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 FBXO5Q9UKT4 447 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 VPS9D1Q9Y2B5 631 aa12.83□□□□□ -0.36
TRAPPC2L-210ENST00000565309 A0A1W2PQM1 296 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 BHMG1C9JSJ3 638 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 NTN3O00634 580 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 LIN7AO14910 233 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 ZW10O43264 779 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 MT-CO3P00414 261 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 JUPP14923 745 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CCR7P32248 378 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CSE1LP55060 971 aaKnown RBP12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 ADARP55265 1226 aaKnown RBP12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 RPA4Q13156 261 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 SPIDRQ14159 915 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 NR1D2Q14995 579 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 AMZ1Q400G9 498 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 SYTL3Q4VX76 610 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CTSL3PQ5NE16 218 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CAPRIN2Q6IMN6 1127 aaKnown RBP12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CAPN12Q6ZSI9 719 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 WDR48Q8TAF3 677 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 GABPB2Q8TAK5 448 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 SH3KBP1Q96B97 665 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 RMDN2Q96LZ7 410 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 GFM1Q96RP9 751 aaKnown RBP12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 OR52A5Q9H2C5 316 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 L2HGDHQ9H9P8 463 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 SLC40A1Q9NP59 571 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 FAM114A2Q9NRY5 505 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 ZDHHC18Q9NUE0 388 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 IMP3Q9NV31 184 aaKnown RBP12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 KCNK4Q9NYG8 393 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 KLK13Q9UKR3 277 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 PCDHB1Q9Y5F3 818 aa12.82□□□□□ -0.36
TRAPPC2L-210ENST00000565309 PTPRBP23467 1997 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 FREM2Q5SZK8 3169 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 IGHV1OR21-1A0A087WYE8 117 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 SLC5A10A0PJK1 596 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 H3BMM5 538 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 HAUS5O94927 633 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 ESR1P03372 595 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 MTHFD1P11586 935 aaKnown RBP12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CD1CP29017 333 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CARSP49589 748 aaKnown RBP12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 PPM1FP49593 454 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 MPP1Q00013 466 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 TARDBPQ13148 414 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 FRG1Q14331 258 aaKnown RBP12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 TEDDM1Q5T9Z0 273 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CDCP2Q5VXM1 449 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 NKAIN2Q5VXU1 208 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 DUS1LQ6P1R4 473 aaKnown RBP12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 CNSTQ6PJW8 725 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 RBM44Q6ZP01 1051 aaKnown RBP12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 TMEM26Q6ZUK4 368 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 USP53Q70EK8 1073 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 PALM2Q8IXS6 379 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 C2CD4AQ8NCU7 369 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 LRRN4CLQ8ND94 238 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 IFT81Q8WYA0 676 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 TMEM159Q96B96 161 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 PANX3Q96QZ0 392 aa12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC2L-210ENST00000565309 FOXP3Q9BZS1 431 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms