RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 F8W8V4 182 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 AGRPO00253 132 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 MPSTP25325 297 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 PREPP48147 710 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 ARCN1P48444 511 aaKnown RBP18.19■□□□□ 0.5
PKD1-229ENST00000564890 LIMK2P53671 638 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 C2orf54Q08AI8 447 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 CAPRIN2Q6IMN6 1127 aaKnown RBP18.19■□□□□ 0.5
PKD1-229ENST00000564890 MRNIPQ6NTE8 343 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 DUS1LQ6P1R4 473 aaKnown RBP18.19■□□□□ 0.5
PKD1-229ENST00000564890 TMEM71Q6P5X7 295 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 ZNF449Q6P9G9 518 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 RAB11FIP2Q7L804 512 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 ELMO1Q92556 727 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 CCDC74BQ96LY2 380 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 TRIM31Q9BZY9 425 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.19■□□□□ 0.5
PKD1-229ENST00000564890 RPS6KL1Q9Y6S9 549 aa18.19■□□□□ 0.5
PKD1-229ENST00000564890 PRMT5O14744 637 aaPredicted RBP18.18■□□□□ 0.5
PKD1-229ENST00000564890 PLD2O14939 933 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 NDUFS3O75489 264 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 UBXN7O94888 489 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 TYRP1P17643 537 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 AMD1P17707 334 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 ITGB6P18564 788 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 PDHA2P29803 388 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 MRPS25P82663 173 aaKnown RBP18.18■□□□□ 0.5
PKD1-229ENST00000564890 RPA4Q13156 261 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 EIF3IQ13347 325 aaKnown RBP18.18■□□□□ 0.5
PKD1-229ENST00000564890 MORF4L2Q15014 288 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 BRD3Q15059 726 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 DNAJC21Q5F1R6 531 aaKnown RBP18.18■□□□□ 0.5
PKD1-229ENST00000564890 WDR74Q6RFH5 385 aaPredicted RBP18.18■□□□□ 0.5
PKD1-229ENST00000564890 SDCCAG8Q86SQ7 713 aaPredicted RBP18.18■□□□□ 0.5
PKD1-229ENST00000564890 TMEM135Q86UB9 458 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 PROSER1Q86XN7 944 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 FBXO39Q8N4B4 442 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 JPH3Q8WXH2 748 aaPredicted RBP18.18■□□□□ 0.5
PKD1-229ENST00000564890 STAMBPL1Q96FJ0 436 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 SNF8Q96H20 258 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 PRR11Q96HE9 360 aaPredicted RBP18.18■□□□□ 0.5
PKD1-229ENST00000564890 OR52A5Q9H2C5 316 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 IL1RAPL1Q9NZN1 696 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 OGFRQ9NZT2 677 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 LOXL2Q9Y4K0 774 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 PCDHGA8Q9Y5G5 932 aa18.18■□□□□ 0.5
PKD1-229ENST00000564890 ZCWPW2A0A1B0GU75 182 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 EFCAB8A8MWE9 144 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 TAF4O00268 1085 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 IFRD1O00458 451 aaPredicted RBP18.17■□□□□ 0.5
PKD1-229ENST00000564890 LIN7AO14910 233 aaPredicted RBP18.17■□□□□ 0.5
PKD1-229ENST00000564890 BANF1O75531 89 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 USP1O94782 785 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 THRAP10827 490 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 HGFP14210 728 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 RBMS1P29558 406 aaKnown RBP18.17■□□□□ 0.5
PKD1-229ENST00000564890 ITGA8P53708 1063 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 DHX9Q08211 1270 aaKnown RBP18.17■□□□□ 0.5
PKD1-229ENST00000564890 TRA2AQ13595 282 aaKnown RBP eCLIP18.17■□□□□ 0.5
PKD1-229ENST00000564890 BOP1Q14137 746 aaKnown RBP18.17■□□□□ 0.5
PKD1-229ENST00000564890 KRT33BQ14525 404 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 C16orf72Q14CZ0 275 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 SYTL3Q4VX76 610 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 HIBCHQ6NVY1 386 aaPredicted RBP18.17■□□□□ 0.5
PKD1-229ENST00000564890 NEPROQ6NW34 567 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 NAPRTQ6XQN6 538 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 LSMEM2Q8N112 164 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 RCBTB1Q8NDN9 531 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 TMEM159Q96B96 161 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 TRIM44Q96DX7 344 aaPredicted RBP18.17■□□□□ 0.5
PKD1-229ENST00000564890 CMKLR1Q99788 373 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 TSSK1BQ9BXA7 367 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 HEBP2Q9Y5Z4 205 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 ASPMQ8IZT6 3477 aa18.17■□□□□ 0.5
PKD1-229ENST00000564890 APC2O95996 2303 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 UBA6A0AVT1 1052 aaPredicted RBP18.16■□□□□ 0.5
PKD1-229ENST00000564890 FAM187AA6NFU0 413 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 IQCF5A8MTL0 148 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 SMAPO00193 183 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 PFDN6O15212 129 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 DXOO77932 396 aaKnown RBP18.16■□□□□ 0.5
PKD1-229ENST00000564890 SEC31AO94979 1220 aaKnown RBP18.16■□□□□ 0.5
PKD1-229ENST00000564890 TNFSF15O95150 251 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 JMJD7P0C870 316 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 PGAM1P18669 254 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 OGNP20774 298 aaKnown RBP18.16■□□□□ 0.5
PKD1-229ENST00000564890 THOC5Q13769 683 aaKnown RBP18.16■□□□□ 0.5
PKD1-229ENST00000564890 PLCL1Q15111 1095 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 LONRF1Q17RB8 773 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 TYSND1Q2T9J0 566 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 TBC1D25Q3MII6 688 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 BBS9Q3SYG4 887 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 MSS51Q4VC12 460 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 SNAP47Q5SQN1 464 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 RNF187Q5TA31 235 aaPredicted RBP18.16■□□□□ 0.5
PKD1-229ENST00000564890 PTRHD1Q6GMV3 140 aaKnown RBP18.16■□□□□ 0.5
PKD1-229ENST00000564890 IGF2-ASQ6U949 168 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 MAATS1Q7Z4T9 603 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 PDZD3Q86UT5 571 aa18.16■□□□□ 0.5
PKD1-229ENST00000564890 LRRC6Q86X45 466 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms