RNA–Protein interactions for RNA: ENST00000564547.1

TRAPPC2L-208, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 2

Gene TRAPPC2L, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-208ENST00000564547 SSC4DQ8WTU2 575 aa13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 UBXN4Q92575 508 aa13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 HAUS1Q96CS2 278 aa13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 FAM96AQ9H5X1 160 aa13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 SPTLC3Q9NUV7 552 aa13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 PCMTD2Q9NV79 361 aa13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 IFNKQ9P0W0 207 aa13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 SLC24A2Q9UI40 661 aa13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 VPS4AQ9UN37 437 aa13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 ARL5AQ9Y689 179 aa13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 BZW2Q9Y6E2 419 aaKnown RBP13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 MDC1Q14676 2089 aaKnown RBP13.73□□□□□ -0.21
TRAPPC2L-208ENST00000564547 APCP25054 2843 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 MEN1O00255 615 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 KRT1P04264 644 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 ST6GAL1P15907 406 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 CDKN1CP49918 316 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 TUBB4BP68371 445 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 HSD11B2P80365 405 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 ATP1A4Q13733 1029 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 TUBB2AQ13885 445 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 PDK1Q15118 436 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 TAZQ16635 292 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 ZNF658BQ4V348 819 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 SPOCD1Q6ZMY3 1216 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 SYVN1Q86TM6 617 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 MAP7D3Q8IWC1 876 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 DSELQ8IZU8 1212 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 ZNF567Q8N184 647 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 LMNTD1Q8N9Z9 388 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 AVL9Q8NBF6 648 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 PHC3Q8NDX5 983 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 BLOC1S5Q8TDH9 187 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 APOL2Q9BQE5 337 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 TUBB2BQ9BVA1 445 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 GPR87Q9BY21 358 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 KCND1Q9NSA2 647 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 UVRAGQ9P2Y5 699 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 NTNG1Q9Y2I2 539 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 LUC7L2Q9Y383 392 aaKnown RBP13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 PCDHGA9Q9Y5G4 932 aaKnown RBP13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 POLEQ07864 2286 aa13.72□□□□□ -0.21
TRAPPC2L-208ENST00000564547 PIKFYVEQ9Y2I7 2098 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 CCDC88CQ9P219 2028 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 A0A0A6YYK5 440 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 GLYATL1P3A0A0U1RQE8 302 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 TLCD2A6NGC4 264 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 H2AFZP0C0S5 128 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 TPBGLP0DKB5 382 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 LPOP22079 712 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 SPAM1P38567 509 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 CDKN2BP42772 138 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 LMAN1P49257 510 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 UBASH3AP57075 661 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 XIAPP98170 497 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 PLCL1Q15111 1095 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 SLC1A5Q15758 541 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 ZIC1Q15915 447 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 IZUMO3Q5VZ72 239 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 ZNF385CQ66K41 422 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 H2AFVQ71UI9 128 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 TRIM73Q86UV7 250 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 ZC3H18Q86VM9 953 aaKnown RBP13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 TMEM126BQ8IUX1 230 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 RBM12BQ8IXT5 1001 aaKnown RBP13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 AMER2Q8N7J2 671 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 IPMKQ8NFU5 416 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 PRR7Q8TB68 274 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 C12orf66Q96MD2 445 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 NAT10Q9H0A0 1025 aaKnown RBP13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 XKR8Q9H6D3 395 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 FAM60AQ9NP50 221 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 ACSS2Q9NR19 701 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 FKBPLQ9UIM3 349 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 TCFL5Q9UL49 500 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 BTRCQ9Y297 605 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 CSAG2Q9Y5P2 127 aa13.71□□□□□ -0.21
TRAPPC2L-208ENST00000564547 UBA6A0AVT1 1052 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 SYCE3A1L190 88 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 WIPF3A6NGB9 483 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 CPNE3O75131 537 aaKnown RBP13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 TMEM63AO94886 807 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 MT-ND3P03897 115 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 TMEM253P0C7T8 217 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 CBSLP0DN79 551 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 PDHA2P29803 388 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 CBSP35520 551 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 DCTP40126 519 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 HALP42357 657 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 RPS15P62841 145 aaKnown RBP13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 ACY1Q03154 408 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 PPP2R5EQ16537 467 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 SLC18A3Q16572 532 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 KAZNQ674X7 775 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 CDHR3Q6ZTQ4 885 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 CISD2Q8N5K1 135 aaKnown RBP13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 EFCAB3Q8N7B9 438 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 OR13C4Q8NGS5 318 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 THAP4Q8WY91 577 aa13.7□□□□□ -0.22
TRAPPC2L-208ENST00000564547 SNRNP40Q96DI7 357 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms