RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	ZIM2	Q9NZV7	527 aa		4.21	□□□□□ -1.74
MACF1-231	ENST00000564288	CLCA2	Q9UQC9	943 aa		4.21	□□□□□ -1.74
MACF1-231	ENST00000564288	UNCX	A6NJT0	531 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ISL2	Q96A47	359 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TESC	Q96BS2	214 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PDZD7	Q9H5P4	517 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ASB14	A6NK59	587 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ADAM10	O14672	748 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ALDH1A2	O94788	518 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SRSF11	Q05519	484 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SCUBE3	Q8IX30	993 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	hCG_1818297	A0A087WSY0	165 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	E2F8	A0AVK6	867 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PSMD8	P48556	350 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	KIAA1614	Q5VZ46	1190 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	UXS1	Q8NBZ7	420 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ASPN	Q9BXN1	380 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PCDHAC1	Q9H158	963 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ERVK-5	Q9HDB9	667 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ERVW-1	Q9UQF0	538 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	MTHFD1	P11586	935 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	HOXD10	P28358	340 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	FMO1	Q01740	532 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	LRP8	Q14114	963 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PPM1J	Q5JR12	505 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	LIX1L	Q8IVB5	337 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PPP1R16A	Q96I34	528 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	HPDL	Q96IR7	371 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC9A7	Q96T83	725 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC2A11	Q9BYW1	496 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TMEM138	Q9NPI0	162 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	KCNIP3	Q9Y2W7	256 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CSNK1G3	Q9Y6M4	447 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	MCIDAS	D6RGH6	385 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	MMP20	O60882	483 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CRHBP	P24387	322 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SYT6	Q5T7P8	510 aa	Predicted RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	LLGL2	Q6P1M3	1020 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF567	Q8N184	647 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	HAS1	Q92839	578 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	KCNS3	Q9BQ31	491 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ZYG11B	Q9C0D3	744 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ALG2	Q9H553	416 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CISH	Q9NSE2	258 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PGAP2	Q9UHJ9	254 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ENPP5	Q9UJA9	477 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288		A0A0J9YYE9	177 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	NR0B1	P51843	470 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	RPP38	P78345	283 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288		Q3ZCU0	254 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	FSTL4	Q6MZW2	842 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	C3P1	Q6ZMU1	363 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	RBFA	Q8N0V3	343 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CMTM6	Q9NX76	183 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	EDAR	Q9UNE0	448 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	HCN4	Q9Y3Q4	1203 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF175	Q9Y473	711 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	FGFR1	P11362	822 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TYR	P14679	529 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.2	□□□□□ -1.74	2e-7	■□□□□ 10
MACF1-231	ENST00000564288	HSPA7	P48741	367 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ELP2	Q6IA86	826 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	BRAT1	Q6PJG6	821 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	MOB2	Q70IA6	237 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CADM2	Q8N3J6	435 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	VGLL2	Q8N8G2	317 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	LHFPL5	Q8TAF8	219 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ELMO1	Q92556	727 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	NOX1	Q9Y5S8	564 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	ZNF682	O95780	498 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	NFYA	P23511	347 aa	Predicted RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	IGFBP5	P24593	272 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	RPS3A	P61247	264 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	NFIX	Q14938	502 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TRIM40	Q6P9F5	258 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	OR14K1	Q8NGZ2	314 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	MED10	Q9BTT4	135 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TMPRSS11E	Q9UL52	423 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	TCRBV3S1	A0A5B6	114 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CDK1	P06493	297 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	EFNA1	P20827	205 aa	Predicted RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SSTR3	P32745	418 aa	Predicted RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	GZMK	P49863	264 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	HIST2H2AA3	Q6FI13	130 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	THEM5	Q8N1Q8	247 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	MAFIP	Q8WZ33	124 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	PMEPA1	Q969W9	287 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	UHRF1	Q96T88	793 aa	Predicted RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	HEBP1	Q9NRV9	189 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	C14orf105	Q9NVL8	296 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	FBXO5	Q9UKT4	447 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	EIF1AY	O14602	144 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	CLU	P10909	449 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	MGAT1	P26572	445 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	EIF1AX	P47813	144 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	IDH2	P48735	452 aa	Known RBP	4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	HK3	P52790	923 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	SLC6A3	Q01959	620 aa		4.2	□□□□□ -1.74
MACF1-231	ENST00000564288	FAM198B	Q6UWH4	519 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms