RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 NEDD9Q14511 834 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 PSMD6Q15008 389 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 HIST2H2ACQ16777 129 aaPredicted RBP4.9□□□□□ -1.63
LINC00254-201ENST00000563416 KIF19Q2TAC6 998 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 ASPRV1Q53RT3 343 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 XKR9Q5GH70 373 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 C1QTNF12Q5T7M4 302 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 SNRNP48Q6IEG0 339 aaKnown RBP4.9□□□□□ -1.63
LINC00254-201ENST00000563416 CPLX2Q6PUV4 134 aaKnown RBP4.9□□□□□ -1.63
LINC00254-201ENST00000563416 KRT74Q7RTS7 529 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 PLD5Q8N7P1 536 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 NEXN-AS1Q8NBZ9 246 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 SMRP1Q8NCR6 262 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 SNAPC3Q92966 411 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 APOPT1Q96IL0 206 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 DUX5Q96PT3 197 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 MXRA8Q9BRK3 442 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 NUF2Q9BZD4 464 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 PDCL3Q9H2J4 239 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 TTYH1Q9H313 450 aaPredicted RBP4.9□□□□□ -1.63
LINC00254-201ENST00000563416 KAT14Q9H8E8 782 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 LY9Q9HBG7 655 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 RAVER2Q9HCJ3 691 aaKnown RBP4.9□□□□□ -1.63
LINC00254-201ENST00000563416 HAUS2Q9NVX0 235 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 SLC25A10Q9UBX3 287 aaPredicted RBP4.9□□□□□ -1.63
LINC00254-201ENST00000563416 TBC1D29Q9UFV1 150 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 RIPK3Q9Y572 518 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 NFS1Q9Y697 457 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 NID2Q14112 1375 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 GBF1Q92538 1859 aa4.9□□□□□ -1.63
LINC00254-201ENST00000563416 IGLV5-37A0A075B6J1 123 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 TEX13CA0A0J9YWL9 993 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 ERICH2A1L162 156 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 SYNDIG1LA6NDD5 238 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 TTC36A6NLP5 189 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 SH2B2O14492 632 aaPredicted RBP4.89□□□□□ -1.63
LINC00254-201ENST00000563416 IFIT3O14879 490 aaKnown RBP4.89□□□□□ -1.63
LINC00254-201ENST00000563416 CCL5P13501 91 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 COX7A2P14406 83 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 CLDN2P57739 230 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 UBXN2AP68543 259 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 BNC1Q01954 994 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 IKQ13123 557 aaPredicted RBP4.89□□□□□ -1.63
LINC00254-201ENST00000563416 WTAPQ15007 396 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 CCL14Q16627 93 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 CHST3Q7LGC8 479 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 C16orf82Q7Z2V1 217 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 R3HCC1LQ7Z5L2 792 aaKnown RBP4.89□□□□□ -1.63
LINC00254-201ENST00000563416 FAM133AQ8N9E0 248 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 SCCPDHQ8NBX0 429 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 CREB3L4Q8TEY5 395 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 WASF1Q92558 559 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 FBXL8Q96CD0 374 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 ADGRG7Q96K78 797 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 OR1F2PQ96R84 312 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 BBS4Q96RK4 519 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 ALDH8A1Q9H2A2 487 aaPredicted RBP4.89□□□□□ -1.63
LINC00254-201ENST00000563416 GHITMQ9H3K2 345 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 PLSCR4Q9NRQ2 329 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 MPP6Q9NZW5 540 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 NFKBIL1Q9UBC1 381 aaPredicted RBP4.89□□□□□ -1.63
LINC00254-201ENST00000563416 MAD2L2Q9UI95 211 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 FAM96BQ9Y3D0 163 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 PFASO15067 1338 aa4.89□□□□□ -1.63
LINC00254-201ENST00000563416 SIP14410 1827 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 ARID2Q68CP9 1835 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 PLSCR5A0PG75 271 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 PRR23D1E9PI22 279 aaPredicted RBP4.88□□□□□ -1.63
LINC00254-201ENST00000563416 CYTH3O43739 400 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 DKC1O60832 514 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC00254-201ENST00000563416 PTP4A3O75365 173 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 TACC1O75410 805 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 HEXAP06865 529 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 PGK2P07205 417 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 GOLGA8HP0CJ92 632 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 PRR23D2P0DMB1 279 aaPredicted RBP4.88□□□□□ -1.63
LINC00254-201ENST00000563416 CYBAP13498 195 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 ARL3P36405 182 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 PAFAH1B1P43034 410 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 PDLIM4P50479 330 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 UFM1P61960 85 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 RPL36AP83881 106 aaKnown RBP4.88□□□□□ -1.63
LINC00254-201ENST00000563416 MYBPHQ13203 477 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 CDC37Q16543 378 aaPredicted RBP4.88□□□□□ -1.63
LINC00254-201ENST00000563416 CALCRLQ16602 461 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 TCTN1Q2MV58 587 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 ARMC3Q5W041 872 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 C9orf57Q5W0N0 161 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 SPSB3Q6PJ21 355 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 PRSS57Q6UWY2 283 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 FBXL16Q8N461 479 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 ZCCHC9Q8N567 271 aaKnown RBP4.88□□□□□ -1.63
LINC00254-201ENST00000563416 TRPV1Q8NER1 839 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 LMO3Q8TAP4 145 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 ZNF570Q96NI8 536 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 NEK1Q96PY6 1258 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 H2AFJQ9BTM1 129 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 CPVLQ9H3G5 476 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 SYNCQ9H7C4 482 aa4.88□□□□□ -1.63
LINC00254-201ENST00000563416 C20orf141Q9NUB4 165 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms