RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 WDR48Q8TAF3 677 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 DCUN1D1Q96GG9 259 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 SNF8Q96H20 258 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 WDR83Q9BRX9 315 aaKnown RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 PLAC1Q9HBJ0 212 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 SARS2Q9NP81 518 aaKnown RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 CATSPERZQ9NTU4 200 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 ZNF624Q9P2J8 865 aaPredicted RBP6.07□□□□□ -1.44
CNOT1-204ENST00000563130 DNAJC16Q9Y2G8 782 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 WDR37Q9Y2I8 494 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 MSRB2Q9Y3D2 182 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 MRFAP1Q9Y605 127 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 PRSS21Q9Y6M0 314 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 PTPRBP23467 1997 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 WDFY3Q8IZQ1 3526 aa6.07□□□□□ -1.44
CNOT1-204ENST00000563130 E7ESA3 106 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 QSOX1O00391 747 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 TCEA3O75764 348 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 VAPBO95292 243 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 GSTM1P09488 218 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 SLC2A4P14672 509 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 VCLP18206 1134 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 SPINK2P20155 84 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 RPL10P27635 214 aaKnown RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 GPR3P46089 330 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 TTPAP49638 278 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 PDX1P52945 283 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 DRG2P55039 364 aaKnown RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 ADARP55265 1226 aaKnown RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 MRPS25P82663 173 aaKnown RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 GSTM4Q03013 218 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 CKAP4Q07065 602 aaKnown RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 SQSTM1Q13501 440 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 TUBB2AQ13885 445 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 CLCA4Q14CN2 919 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 CCDC157Q569K6 752 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 AARS2Q5JTZ9 985 aaKnown RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 MAPK15Q8TD08 544 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.06□□□□□ -1.448e-8■■■■■ 61.9
CNOT1-204ENST00000563130 STAMBPL1Q96FJ0 436 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 EBNA1BP2Q99848 306 aaKnown RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 TUBB2BQ9BVA1 445 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 GRIP2Q9C0E4 1043 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 P2RY12Q9H244 342 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 OSGEPL1Q9H4B0 414 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 UCK1Q9HA47 277 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 SAMD15Q9P1V8 674 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 ANGPTL2Q9UKU9 493 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 CLCA2Q9UQC9 943 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 SNX24Q9Y343 169 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 RPS6KL1Q9Y6S9 549 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 FAM169AQ9Y6X4 670 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 TRBV23OR9-2A0A075B6M9 112 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 TERTO14746 1132 aaKnown RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 SNX2O60749 519 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 MT-CO3P00414 261 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 PGAM1P18669 254 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 PAMP19021 973 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 OGNP20774 298 aaKnown RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 RPS3P23396 243 aaKnown RBP eCLIP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 HHEXQ03014 270 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 CAPRIN2Q6IMN6 1127 aaKnown RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 CASC4Q6P4E1 433 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 CENPUQ71F23 418 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 LDB1Q86U70 411 aaPredicted RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 SLC9B2Q86UD5 537 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 CCNJLQ8IV13 435 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 IGDCC3Q8IVU1 814 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 PDIK1LQ8N165 341 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 LILRA3Q8N6C8 439 aaPredicted RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 AVL9Q8NBF6 648 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 BBOF1Q8ND07 529 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 KIF18AQ8NI77 898 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 HM13Q8TCT9 377 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 SEC14L1Q92503 715 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 GATA6Q92908 595 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 ZNF669Q96BR6 464 aaPredicted RBP6.06□□□□□ -1.44
CNOT1-204ENST00000563130 LRRC39Q96DD0 335 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 PWWP2AQ96N64 755 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 TCF12Q99081 682 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 TTC1Q99614 292 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 CCM2Q9BSQ5 444 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 NAT9Q9BTE0 207 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 TRIM31Q9BZY9 425 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 ABCG4Q9H172 646 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 LRRN3Q9H3W5 708 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 COG4Q9H9E3 785 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 SLC40A1Q9NP59 571 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 POT1Q9NUX5 634 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 GRHL1Q9NZI5 618 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 WHRNQ9P202 907 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 CPNE7Q9UBL6 633 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 ANAPC5Q9UJX4 755 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 ACSL5Q9ULC5 683 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 HRH3Q9Y5N1 445 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 TEX264Q9Y6I9 313 aa6.06□□□□□ -1.44
CNOT1-204ENST00000563130 IGHV1OR21-1A0A087WYE8 117 aa6.05□□□□□ -1.44
CNOT1-204ENST00000563130 FAM149AA5PLN7 773 aa6.05□□□□□ -1.44
CNOT1-204ENST00000563130 OR52A4PA6NMU1 304 aa6.05□□□□□ -1.44
CNOT1-204ENST00000563130 RHPN2P1A8MT19 583 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms