RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	CREB5	Q02930	508 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	YWHAH	Q04917	246 aa	Predicted RBP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	PRKCZ	Q05513	592 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	C17orf67	Q0P5P2	114 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	MORF4L2	Q15014	288 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	TRADD	Q15628	312 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZNF674	Q2M3X9	581 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SMTNL2	Q2TAL5	461 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SYTL3	Q4VX76	610 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SBK1	Q52WX2	424 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	PXDC1	Q5TGL8	231 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SNX30	Q5VWJ9	437 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	AP1AR	Q63HQ0	302 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	CES5A	Q6NT32	575 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SHC4	Q6S5L8	630 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	MOB3C	Q70IA8	216 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	GLRX5	Q86SX6	157 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	TADA2B	Q86TJ2	420 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	GPAT4	Q86UL3	456 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	CAMK1D	Q8IU85	385 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAM217A	Q8IXS0	508 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	ANKRD13C	Q8N6S4	541 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	HORMAD2	Q8N7B1	307 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	GMCL1P1	Q8NEA9	526 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	CEP76	Q8TAP6	659 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	KCNG4	Q8TDN1	519 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	KRT35	Q92764	455 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZNF333	Q96JL9	665 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	CEP295NL	Q96MC4	621 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	CLSTN3	Q9BQT9	956 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SYNC	Q9H7C4	482 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	VCPKMT	Q9H867	229 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	TM9SF3	Q9HD45	589 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	TAS2R10	Q9NYW0	307 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	KCND2	Q9NZV8	630 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	HOOK1	Q9UJC3	728 aa	Known RBP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	PTBP2	Q9UKA9	531 aa	Known RBP	4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	MTUS1	Q9ULD2	1270 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLC4A4	Q9Y6R1	1079 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	MYH8	P13535	1937 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	PLIN4	Q96Q06	1357 aa		4.12	□□□□□ -1.75
LRRC28-222	ENST00000561431	LAMA4	Q16363	1823 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	CENPF	P49454	3210 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431		A0A096LPK6	155 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	ARPC4-TTLL3	A0A0A6YYG9	625 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	IGKV6D-41	A0A0C4DH26	115 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431		A0A0D9SFI3	127 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	C17orf102	A2RUQ5	167 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	CTAGE9	A4FU28	777 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	RGSL1	A5PLK6	1076 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	WIPF3	A6NGB9	483 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	C17orf100	A8MU93	164 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	GTPBP1	O00178	669 aa	Known RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	NMT2	O60551	498 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	BEST1	O76090	585 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	WNT1	P04628	370 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	GALT	P07902	379 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	CELA2A	P08217	269 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	CSH1	P0DML2	217 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	CSH2	P0DML3	217 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	UBL4A	P11441	157 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	EEF1D	P29692	281 aa	Known RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	ACSL1	P33121	698 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	RDX	P35241	583 aa	Known RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	MTIF2	P46199	727 aa	Known RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	CENPA	P49450	140 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	ETV1	P50549	477 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	BLK	P51451	505 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZNF41	P51814	821 aa	Predicted RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	PRMT2	P55345	433 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	KRTAP10-7	P60409	375 aa	Predicted RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	COG7	P83436	770 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	EPS8	Q12929	822 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	CHAF1B	Q13112	559 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	PRPF4B	Q13523	1007 aa	Known RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	DCTN2	Q13561	401 aa	Known RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	STK11	Q15831	433 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	KYNU	Q16719	465 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	ME3	Q16798	604 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMEM266	Q2M3C6	531 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	KRT71	Q3SY84	523 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431		Q4G0T1	1027 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLC9B1	Q4ZJI4	515 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZNF667	Q5HYK9	610 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	TOR1AIP1	Q5JTV8	583 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	MANEA	Q5SRI9	462 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZNF626	Q68DY1	528 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMEM81	Q6P7N7	255 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMEM179	Q6ZVK1	233 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	INTS8	Q75QN2	995 aa	Known RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	H1FNT	Q75WM6	255 aa	Predicted RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAM160B2	Q86V87	743 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	PALB2	Q86YC2	1186 aa		4.11	□□□□□ -1.75
LRRC28-222	ENST00000561431	DIS3L2	Q8IYB7	885 aa	Known RBP	4.11	□□□□□ -1.75

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