RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ITGB2P05107 769 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 MTHFD1P11586 935 aaKnown RBP15.61■□□□□ 0.09
LMX1B-204ENST00000561065 HALP42357 657 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 TBR1Q16650 682 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 SKIDA1Q1XH10 827 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 GPR33Q49SQ1 333 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 FAM92BQ6ZTR7 304 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 RBM12BQ8IXT5 1001 aaKnown RBP15.61■□□□□ 0.09
LMX1B-204ENST00000561065 UNC5BQ8IZJ1 945 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 NLGN4XQ8N0W4 816 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 NXPE1Q8N323 547 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 TAB3Q8N5C8 712 aaPredicted RBP15.61■□□□□ 0.09
LMX1B-204ENST00000561065 DNAAF3Q8N9W5 541 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 NLGN4YQ8NFZ3 816 aaPredicted RBP15.61■□□□□ 0.09
LMX1B-204ENST00000561065 DCUN1D1Q96GG9 259 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 INSM2Q96T92 566 aaPredicted RBP15.61■□□□□ 0.09
LMX1B-204ENST00000561065 WWP1Q9H0M0 922 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 IMP3Q9NV31 184 aaKnown RBP15.61■□□□□ 0.09
LMX1B-204ENST00000561065 MGAT4DA6NG13 374 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 F8W8V4 182 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 FAM87AP0C7U9 286 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 TPH1P17752 444 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 ITGALP20701 1170 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 MC4RP32245 332 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 PRLHRP49683 370 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 CDH17Q12864 832 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 SNX1Q13596 522 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 OASLQ15646 514 aaKnown RBP15.6■□□□□ 0.09
LMX1B-204ENST00000561065 ZNF658BQ4V348 819 aaPredicted RBP15.6■□□□□ 0.09
LMX1B-204ENST00000561065 IRGCQ6NXR0 463 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 ZNF449Q6P9G9 518 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 PPP1R21Q6ZMI0 780 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 NLRP9Q7RTR0 991 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 OR2L2Q8NH16 312 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 C1orf54Q8WWF1 131 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 KLHL6Q8WZ60 621 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 LINC00615Q96LM1 132 aaPredicted RBP15.6■□□□□ 0.09
LMX1B-204ENST00000561065 RAB33BQ9H082 229 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 EPHA6Q9UF33 1036 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 CRLS1Q9UJA2 301 aa15.6■□□□□ 0.09
LMX1B-204ENST00000561065 IGLV3-16A0A075B6K0 115 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 IGHV5-51A0A0C4DH38 117 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 TRBV5-4A0A0C4DH59 114 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 POLR1CO15160 346 aaPredicted RBP15.59■□□□□ 0.09
LMX1B-204ENST00000561065 TOX3O15405 576 aaPredicted RBP15.59■□□□□ 0.09
LMX1B-204ENST00000561065 RASSF9O75901 435 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 ITGB6P18564 788 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 PPARGP37231 505 aaPredicted RBP15.59■□□□□ 0.09
LMX1B-204ENST00000561065 SARNPP82979 210 aaKnown RBP15.59■□□□□ 0.09
LMX1B-204ENST00000561065 FOXM1Q08050 763 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 POU6F1Q14863 301 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 CACHD1Q5VU97 1274 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 CERS6Q6ZMG9 384 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 SNX20Q7Z614 316 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 STYXQ8WUJ0 223 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 C12orf66Q96MD2 445 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 OR6C1Q96RD1 312 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 ZPBPQ9BS86 351 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 TLR10Q9BXR5 811 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 RAB6BQ9NRW1 208 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 SEMA5BQ9P283 1151 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 IL17BQ9UHF5 180 aa15.59■□□□□ 0.09
LMX1B-204ENST00000561065 CCDC78A2IDD5 438 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 H7C0S8 307 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 TIAF1O95411 115 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 F8A1P23610 371 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 STAT5AP42229 794 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 PLCL1Q15111 1095 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 ZNF605Q86T29 641 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 PRUNE1Q86TP1 453 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 PIANPQ8IYJ0 282 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 ZSCAN1Q8NBB4 408 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 HM13Q8TCT9 377 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.58■□□□□ 0.08
LMX1B-204ENST00000561065 ELMO2Q96JJ3 720 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 SLC45A3Q96JT2 553 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 COPS8Q99627 209 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 NRTNQ99748 197 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 VPS37BQ9H9H4 285 aa15.58■□□□□ 0.08
LMX1B-204ENST00000561065 NLE1Q9NVX2 485 aaPredicted RBP15.58■□□□□ 0.08
LMX1B-204ENST00000561065 GOLGA6L10A0A0M3HER8 536 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 HEATR9A2RTY3 570 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 OR5K3A6NET4 321 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 B8ZZF3 427 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 ZIC2O95409 532 aaPredicted RBP15.57■□□□□ 0.08
LMX1B-204ENST00000561065 NELFEP18615 380 aaKnown RBP15.57■□□□□ 0.08
LMX1B-204ENST00000561065 ACRV1P26436 265 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 MAP4P27816 1152 aaKnown RBP15.57■□□□□ 0.08
LMX1B-204ENST00000561065 CDK16Q00536 496 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 SEPT6Q14141 434 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 KCNAB1Q14722 419 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 DBN1Q16643 649 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 ATP1A1-AS1Q5TC04 95 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 CAPRIN2Q6IMN6 1127 aaKnown RBP15.57■□□□□ 0.08
LMX1B-204ENST00000561065 SERPINA9Q86WD7 417 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 GLIS1Q8NBF1 620 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 ZDHHC12Q96GR4 267 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 SLC41A2Q96JW4 573 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 PPM1MQ96MI6 270 aa15.57■□□□□ 0.08
LMX1B-204ENST00000561065 MAP3K3Q99759 626 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms