RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 RAB44Q7Z6P3 723 aaPredicted RBP15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 LRRC6Q86X45 466 aa15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 OR6C4Q8NGE1 309 aa15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 GSDMBQ8TAX9 411 aa15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 CALML6Q8TD86 181 aa15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 FAM136AQ96C01 138 aa15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 C9orf72Q96LT7 481 aa15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 INTS10Q9NVR2 710 aaKnown RBP15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 CPNE7Q9UBL6 633 aa15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 FBXO5Q9UKT4 447 aa15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 ACSL5Q9ULC5 683 aa15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 SPTBN2O15020 2390 aa15.19■□□□□ 0.02
LYSMD2-204ENST00000560491 MED19A0JLT2 244 aaPredicted RBP15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 KLHL33A6NCF5 533 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 PFDN6O15212 129 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 HYAL3O43820 417 aaPredicted RBP15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 HAUS5O94927 633 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 ADRB1P08588 477 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 SLC35G4P0C7Q5 338 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 CCR7P32248 378 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 MAGEA4P43358 317 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 ABCG1P45844 678 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 OR1D5P58170 312 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 CCL7P80098 99 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 RPE65Q16518 533 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 SYTL3Q4VX76 610 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 TEDDM1Q5T9Z0 273 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 CNSTQ6PJW8 725 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 SPRED1Q7Z699 444 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 SLC9B2Q86UD5 537 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 MARCH9Q86YJ5 346 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 CNTN4Q8IWV2 1026 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 TRIM48Q8IWZ4 208 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 PALM2Q8IXS6 379 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 LMNTD2Q8IXW0 634 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 C2CD4AQ8NCU7 369 aaPredicted RBP15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 CXorf40BQ96DE9 158 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 C12orf66Q96MD2 445 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 INSM2Q96T92 566 aaPredicted RBP15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 TSSK1BQ9BXA7 367 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 PHACTR1Q9C0D0 580 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 OR52A5Q9H2C5 316 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 SARS2Q9NP81 518 aaKnown RBP15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 IMP3Q9NV31 184 aaKnown RBP15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 VPS9D1Q9Y2B5 631 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 PCDHB1Q9Y5F3 818 aa15.18■□□□□ 0.02
LYSMD2-204ENST00000560491 A0A1W2PQM1 296 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 SLC5A10A0PJK1 596 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 FAM149AA5PLN7 773 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 F8W8V4 182 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 LIN7AO14910 233 aaPredicted RBP15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 PIAS1O75925 651 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 VIPP01282 170 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 ESR1P03372 595 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 RPLP0P05388 317 aaKnown RBP15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 GSTM1P09488 218 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 PKMP14618 531 aaKnown RBP15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 PNLIPP16233 465 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 XRCC1P18887 633 aaPredicted RBP15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 SPINK2P20155 84 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 GABRB3P28472 473 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 ALDH4A1P30038 563 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 ADARP55265 1226 aaKnown RBP15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 E2F1Q01094 437 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 GSTM4Q03013 218 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 FRG1Q14331 258 aaKnown RBP15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 NR1D2Q14995 579 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 TEX35Q5T0J7 233 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 HES3Q5TGS1 186 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 ZNF549Q6P9A3 640 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 SPNS2Q8IVW8 549 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 SLC38A3Q99624 504 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 FOXP3Q9BZS1 431 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 ABCG4Q9H172 646 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 STN1Q9H668 368 aaKnown RBP15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 GALPQ9UBC7 116 aa15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 MTRF1LQ9UGC7 380 aaKnown RBP15.17■□□□□ 0.02
LYSMD2-204ENST00000560491 B4GAT1O43505 415 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 MTHFD1P11586 935 aaKnown RBP15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 AOAHP28039 575 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 LEPRP48357 1165 aaKnown RBP15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 GPX6P59796 221 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 MGAT5Q09328 741 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 HSPA14Q0VDF9 509 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 RPA4Q13156 261 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 AMZ1Q400G9 498 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 NKAIN2Q5VXU1 208 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 CAPRIN2Q6IMN6 1127 aaKnown RBP15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 ERMP1Q7Z2K6 904 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 PDZD3Q86UT5 571 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 VRK3Q8IV63 474 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 JPH3Q8WXH2 748 aaPredicted RBP15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 TMEM159Q96B96 161 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 PANX3Q96QZ0 392 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 FMO2Q99518 471 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 NDNQ99608 321 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 TBC1D10AQ9BXI6 508 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 LRRN3Q9H3W5 708 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 SMYD2Q9NRG4 433 aa15.16■□□□□ 0.02
LYSMD2-204ENST00000560491 POT1Q9NUX5 634 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms