RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 FAM25GB3EWG6 89 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 M0QYV0 167 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 M0R3G1 203 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ARPC2O15144 300 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 HOXC11O43248 304 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 NDUFS2O75306 463 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 VPS4BO75351 444 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 SEC24DO94855 1032 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ENO2P09104 434 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ENDOUP21128 410 aaKnown RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 PCMT1P22061 227 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 GPX3P22352 226 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 EEF1B2P24534 225 aaKnown RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 CXCR2P25025 360 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ACVR2AP27037 513 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 HTR1BP28222 390 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 PKLRP30613 574 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 POLR2IP36954 125 aaKnown RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 RAP1GAPP47736 663 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ALDH7A1P49419 539 aaKnown RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ATXN3P54252 364 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ARSFP54793 590 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 GJA9P57773 515 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 SESN2P58004 480 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 DEFA1P59665 94 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 DEFA3P59666 94 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 RAB10P61026 200 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 CXCR4P61073 352 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ACTR2P61160 394 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 IRF9Q00978 393 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 IFITM3Q01628 133 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 BNC1Q01954 994 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 PRKCEQ02156 737 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 CD300CQ08708 224 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 INCA1Q0VD86 236 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 KCNAB2Q13303 367 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 EMC2Q15006 297 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 PAFAH1B3Q15102 231 aaKnown RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 SMUG1Q53HV7 270 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 TMEM177Q53S58 311 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF667Q5HYK9 610 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 C6orf141Q5SZD1 244 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 LCLAT1Q6UWP7 414 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 RSPO2Q6UXX9 243 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 CYP2R1Q6VVX0 501 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 LBX2Q6XYB7 198 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 FAM183BPQ6ZVS7 135 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 LARP4Q71RC2 724 aaKnown RBP eCLIP5.89□□□□□ -1.475e-6■□□□□ 10.3
SNRPA1-209ENST00000560307 STRADAQ7RTN6 431 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 TAS2R42Q7RTR8 314 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 CATSPER4Q7RTX7 472 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 KCNMB4Q86W47 210 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 HORMAD1Q86X24 394 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 KIF18BQ86Y91 864 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 LYSMD2Q8IV50 215 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 OFCC1Q8IZS5 231 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 FSTL5Q8N475 847 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ASCC1Q8N9N2 400 aaKnown RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 CHDHQ8NE62 594 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF555Q8NEP9 628 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 BPIFB6Q8NFQ5 453 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 OR52E4Q8NGH9 312 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 IL31RAQ8NI17 732 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 GABPB2Q8TAK5 448 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.89□□□□□ -1.477e-11■■■■□ 26.3
SNRPA1-209ENST00000560307 SETD6Q8TBK2 473 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ZFP90Q8TF47 636 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 CENPIQ92674 756 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 YIPF6Q96EC8 236 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 AHCYL2Q96HN2 611 aaKnown RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 TMEM176AQ96HP8 235 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 REXO5Q96IC2 774 aaKnown RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 SCYL1Q96KG9 808 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 FCRL3Q96P31 734 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 PPP1R2P1Q96PQ5 205 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 CLSTN3Q9BQT9 956 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 PDCD2LQ9BRP1 358 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 C11orf84Q9BUA3 381 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 TRAF4Q9BUZ4 470 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 MMP27Q9H306 513 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 TP63Q9H3D4 680 aaPredicted RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 DHX35Q9H5Z1 703 aaKnown RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 C7orf69Q9H7B7 122 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 EMC7Q9NPA0 242 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 CCNB1IP1Q9NPC3 277 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 CNGB3Q9NQW8 809 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 SACM1LQ9NTJ5 587 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 GGA3Q9NZ52 723 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 COL20A1Q9P218 1284 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 SRP68Q9UHB9 627 aaKnown RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 MAGEL2Q9UJ55 1249 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF229Q9UJW7 825 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF221Q9UK13 617 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 CPSF3Q9UKF6 684 aaKnown RBP5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ZBTB21Q9ULJ3 1066 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 AURKCQ9UQB9 309 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ERVW-1Q9UQF0 538 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ACOT9Q9Y305 439 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 ZNF236Q9UL36 1845 aa5.89□□□□□ -1.47
SNRPA1-209ENST00000560307 RALGAPA2Q2PPJ7 1873 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms