RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CRYMQ14894 314 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 BRD3Q15059 726 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 TYSND1Q2T9J0 566 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 ZNF658BQ4V348 819 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-205ENST00000558428 SYTL3Q4VX76 610 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 HP1BP3Q5SSJ5 553 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-205ENST00000558428 RNF187Q5TA31 235 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-205ENST00000558428 NKAIN2Q5VXU1 208 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 ZNF470Q6ECI4 717 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 PTRHD1Q6GMV3 140 aaKnown RBP12.09□□□□□ -0.47
SMAD3-205ENST00000558428 C8orf74Q6P047 294 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 DUS1LQ6P1R4 473 aaKnown RBP12.09□□□□□ -0.47
SMAD3-205ENST00000558428 TMEM26Q6ZUK4 368 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 USP53Q70EK8 1073 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 PIM3Q86V86 326 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 LRRC6Q86X45 466 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 CILP2Q8IUL8 1156 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 RBM12BQ8IXT5 1001 aaKnown RBP12.09□□□□□ -0.47
SMAD3-205ENST00000558428 MNS1Q8NEH6 495 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-205ENST00000558428 OR10G6Q8NH81 332 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 LRRC39Q96DD0 335 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 INSM2Q96T92 566 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-205ENST00000558428 TCF12Q99081 682 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 TBC1D10AQ9BXI6 508 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 UCK1Q9HA47 277 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 RDH14Q9HBH5 336 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 GNPTGQ9UJJ9 305 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 CHMP2BQ9UQN3 213 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 ENTPD2Q9Y5L3 495 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 FREM2Q5SZK8 3169 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 ACACAQ13085 2346 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 CTAGE15A4D2H0 777 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 TRABD2BA6NFA1 517 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 IQCF5A8MTL0 148 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 IFRD1O00458 451 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-205ENST00000558428 LIN7AO14910 233 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-205ENST00000558428 DUX1O43812 170 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 CTAGE8P0CG41 777 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 RPS3P23396 243 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMAD3-205ENST00000558428 PDHA2P29803 388 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 FMO4P31512 558 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 INHBCP55103 352 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 SLC7A5Q01650 507 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 PDIA2Q13087 525 aaKnown RBP12.08□□□□□ -0.48
SMAD3-205ENST00000558428 RPA4Q13156 261 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 GPR18Q14330 331 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 SPANXN3Q5MJ09 141 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 CAPRIN2Q6IMN6 1127 aaKnown RBP12.08□□□□□ -0.48
SMAD3-205ENST00000558428 UNQ6494/PRO21346Q6UXR6 183 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 NAPRTQ6XQN6 538 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 CENPUQ71F23 418 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 TMPRSS9Q7Z410 1059 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 B3GNT8Q7Z7M8 397 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 CTAGE6Q86UF2 777 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 KCNMB4Q86W47 210 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 IGDCC3Q8IVU1 814 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 DENND6AQ8IWF6 608 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 CTAGE4Q8IX94 777 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 LMNTD2Q8IXW0 634 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 KRT222Q8N1A0 295 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 LKAAEAR1Q8TD35 194 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 CALML6Q8TD86 181 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 LPGAT1Q92604 370 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 GATA6Q92908 595 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 CFAP36Q96G28 342 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 ATXN7L3BQ96GX2 97 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 TMEM74Q96NL1 305 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 PANX3Q96QZ0 392 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 NUDT22Q9BRQ3 303 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 LRRC1Q9BTT6 524 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 CARD6Q9BX69 1037 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 FOXP3Q9BZS1 431 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 P2RY12Q9H244 342 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 OR52A5Q9H2C5 316 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 EPB41L5Q9HCM4 733 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 SLC40A1Q9NP59 571 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 IARS2Q9NSE4 1012 aaKnown RBP12.08□□□□□ -0.48
SMAD3-205ENST00000558428 GRHL1Q9NZI5 618 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 ZC3H7BQ9UGR2 993 aaKnown RBP12.08□□□□□ -0.48
SMAD3-205ENST00000558428 VPS9D1Q9Y2B5 631 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 CRYL1Q9Y2S2 319 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 HEBP2Q9Y5Z4 205 aa12.08□□□□□ -0.48
SMAD3-205ENST00000558428 SLC5A10A0PJK1 596 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 C1QTNF9BB2RNN3 333 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 E7ESA3 106 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 TMX2-CTNND1H3BSU7 103 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 F7P08709 466 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-205ENST00000558428 C1QTNF9P0C862 333 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 ERVK-10P10266 1014 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 AMD1P17707 334 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 CCR7P32248 378 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 CSF2RBP32927 897 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 SLC1A2P43004 574 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 CD151P48509 253 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 CSE1LP55060 971 aaKnown RBP12.07□□□□□ -0.48
SMAD3-205ENST00000558428 PLOD1Q02809 727 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-205ENST00000558428 CTBP1Q13363 440 aa12.07□□□□□ -0.48
SMAD3-205ENST00000558428 KRT33BQ14525 404 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms