RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 RHEBL1Q8TAI7 183 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 STAG3L4Q8TBR4 150 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 SKA2Q8WVK7 121 aaPredicted RBP16.55■□□□□ 0.24
SNX1-203ENST00000558040 SREK1Q8WXA9 508 aaKnown RBP16.55■□□□□ 0.24
SNX1-203ENST00000558040 SKA1Q96BD8 255 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 UNKQ9C0B0 810 aaKnown RBP16.55■□□□□ 0.24
SNX1-203ENST00000558040 C12orf65Q9H3J6 166 aaKnown RBP16.55■□□□□ 0.24
SNX1-203ENST00000558040 ALG9Q9H6U8 611 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 CARS2Q9HA77 564 aaKnown RBP16.55■□□□□ 0.24
SNX1-203ENST00000558040 CYP4F12Q9HCS2 524 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 TM9SF3Q9HD45 589 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 XPR1Q9UBH6 696 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 EMCNQ9ULC0 261 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 PRKAB1Q9Y478 270 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 GPSM3Q9Y4H4 160 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 SPTY2D1-AS1A0A0U1RR47 76 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 SYCE1LA8MT33 242 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 TAC1P20366 129 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 MAOBP27338 520 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 SERPINB4P48594 390 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 SRP54P61011 504 aaKnown RBP16.54■□□□□ 0.24
SNX1-203ENST00000558040 IRX4P78413 519 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 PPARDQ03181 441 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 DMPKQ09013 629 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 LRP8Q14114 963 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 ZNF658BQ4V348 819 aaPredicted RBP16.54■□□□□ 0.24
SNX1-203ENST00000558040 PMS2CLQ68D20 193 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 ARMCX6Q7L4S7 300 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 CHST15Q7LFX5 561 aaPredicted RBP16.54■□□□□ 0.24
SNX1-203ENST00000558040 PIWIL4Q7Z3Z4 852 aaKnown RBP16.54■□□□□ 0.24
SNX1-203ENST00000558040 ISCA2Q86U28 154 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 SLC22A15Q8IZD6 547 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 SLC22A18ASQ8N1D0 253 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 OR1E3Q8WZA6 343 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 NELL1Q92832 810 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 DPEP2Q9H4A9 486 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 MLXIPLQ9NP71 852 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 MRPL40Q9NQ50 206 aaKnown RBP16.54■□□□□ 0.24
SNX1-203ENST00000558040 ZSCAN32Q9NX65 697 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 TSR3Q9UJK0 312 aaKnown RBP16.54■□□□□ 0.24
SNX1-203ENST00000558040 RNF112Q9ULX5 631 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 BPTFQ12830 3046 aa16.54■□□□□ 0.24
SNX1-203ENST00000558040 CACNA1IQ9P0X4 2223 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 A0A1W2PR77 199 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 PABPN1LA6NDY0 278 aaKnown RBP16.53■□□□□ 0.24
SNX1-203ENST00000558040 NPEPPSL1A6NEC2 478 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 PRR5-ARHGAP8B1AHC4 643 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 H3BM21 787 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 TK2O00142 265 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 BIRC5O15392 142 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 KERAO60938 352 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 RASGRP1O95267 797 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 TNFP01375 233 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 FUCA1P04066 466 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 C8GP07360 202 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 DHRS4L1P0CG22 281 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 MYL2P10916 166 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 ACP5P13686 325 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 CPA3P15088 417 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 MDH1P40925 334 aaKnown RBP16.53■□□□□ 0.24
SNX1-203ENST00000558040 PREPP48147 710 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 DHPSP49366 369 aaPredicted RBP16.53■□□□□ 0.24
SNX1-203ENST00000558040 BLKP51451 505 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 WDR4P57081 412 aaKnown RBP16.53■□□□□ 0.24
SNX1-203ENST00000558040 SP140Q13342 867 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 NFE2L1Q14494 772 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 ANGPT1Q15389 498 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 TEAD4Q15561 434 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 TSNQ15631 228 aaKnown RBP16.53■□□□□ 0.24
SNX1-203ENST00000558040 ALG11Q2TAA5 492 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 TUBB8Q3ZCM7 444 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 TPRG1LQ5T0D9 272 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 ZYG11AQ6WRX3 759 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 FRA10AC1Q70Z53 315 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 CEP68Q76N32 757 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 PARGQ86W56 976 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 PTERQ96BW5 349 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 PDXPQ96GD0 296 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 FOPNLQ96NB1 174 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 CPSF2Q9P2I0 782 aaKnown RBP16.53■□□□□ 0.24
SNX1-203ENST00000558040 COPG2Q9UBF2 871 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 ACSL5Q9ULC5 683 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 TMCO1Q9UM00 188 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 CDYLQ9Y232 598 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 PCYT1BQ9Y5K3 369 aaPredicted RBP16.53■□□□□ 0.24
SNX1-203ENST00000558040 DGKBQ9Y6T7 804 aa16.53■□□□□ 0.24
SNX1-203ENST00000558040 TLR4O00206 839 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 CDC7O00311 574 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 SLC16A5O15375 505 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 BCAT2O15382 392 aaPredicted RBP16.52■□□□□ 0.24
SNX1-203ENST00000558040 SMIM24O75264 130 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 SP9P0CG40 484 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 NEFHP12036 1026 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 GNSP15586 552 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 AFF3P51826 1226 aaKnown RBP16.52■□□□□ 0.24
SNX1-203ENST00000558040 NUBP1P53384 320 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 ASPHQ12797 758 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 OR4D1Q15615 310 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 PLK5Q496M5 336 aa16.52■□□□□ 0.24
SNX1-203ENST00000558040 METRNLQ641Q3 311 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms