RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MKKSQ9NPJ1 570 aaPredicted RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 PNRC2Q9NPJ4 139 aaKnown RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 PNPLA3Q9NST1 481 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 P4HTMQ9NXG6 502 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 COX16Q9P0S2 106 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 RABL2AQ9UBK7 228 aaPredicted RBP3.72□□□□□ -1.81
TDP1-217ENST00000557782 TRIM10Q9UDY6 481 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 LAMP5Q9UJQ1 280 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 ACSL5Q9ULC5 683 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 ST3GAL5Q9UNP4 418 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 FZD1Q9UP38 647 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 LAMP3Q9UQV4 416 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 NME7Q9Y5B8 376 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 ADAMTS20P59510 1910 aa3.72□□□□□ -1.81
TDP1-217ENST00000557782 ASTN2O75129 1339 aaPredicted RBP3.71□□□□□ -1.81
TDP1-217ENST00000557782 C2orf92A0A1B0GVN3 265 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 SCO2A0A1W2PP80 73 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 A0A1W2PPQ1 181 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 A0A1W2PPW3 197 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 SLC22A23A1A5C7 686 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 FAM149AA5PLN7 773 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 DUXAA6NLW8 204 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 H0YCG3 227 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 UBXN8O00124 270 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 IKBKBO14920 756 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 ANGPT2O15123 496 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 CTDSPLO15194 276 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 PLPP2O43688 288 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 DIRAS3O95661 229 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 EGFP01133 1207 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 C9P02748 559 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 PDHBP11177 359 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 G6PDP11413 515 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 PRG2P13727 222 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 ENO3P13929 434 aaPredicted RBP3.71□□□□□ -1.82
TDP1-217ENST00000557782 NR1D1P20393 614 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 KELP23276 732 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 PBLDP30039 288 aaPredicted RBP3.71□□□□□ -1.82
TDP1-217ENST00000557782 SLC6A6P31641 620 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 DCTDP32321 178 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 PTGS2P35354 604 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 MDH1P40925 334 aaKnown RBP3.71□□□□□ -1.82
TDP1-217ENST00000557782 NPBWR1P48145 328 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 SLC9A3P48764 834 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 RGS7P49802 495 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 POLR2LP62875 67 aaKnown RBP3.71□□□□□ -1.82
TDP1-217ENST00000557782 GALK2Q01415 458 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 FOLH1Q04609 750 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 MRPL28Q13084 256 aaKnown RBP3.71□□□□□ -1.82
TDP1-217ENST00000557782 SCGB2A2Q13296 93 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 TSTA3Q13630 321 aaPredicted RBP3.71□□□□□ -1.82
TDP1-217ENST00000557782 GLIPR1L2Q4G1C9 344 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 DCAF12L2Q5VW00 463 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 RAET1GQ6H3X3 334 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 PODNL1Q6PEZ8 512 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 KCNV1Q6PIU1 500 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 MTSS1LQ765P7 747 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 LIMS2Q7Z4I7 341 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 DDIASQ8IXT1 998 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 SLC44A3Q8N4M1 653 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 SLC24A4Q8NFF2 622 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 APBB2Q92870 758 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 RAB7BQ96AH8 199 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 MRPL38Q96DV4 380 aaKnown RBP3.71□□□□□ -1.82
TDP1-217ENST00000557782 STAMBPL1Q96FJ0 436 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 SPATA33Q96N06 139 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 OR6C1Q96RD1 312 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 CRAMP1Q96RY5 1269 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 SLC38A3Q99624 504 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 FAM213AQ9BRX8 229 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 TCHPQ9BT92 498 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 FNDC11Q9BVV2 318 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 DDX47Q9H0S4 455 aaKnown RBP3.71□□□□□ -1.82
TDP1-217ENST00000557782 ISCUQ9H1K1 167 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 S1PR5Q9H228 398 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 MOV10Q9HCE1 1003 aaKnown RBP3.71□□□□□ -1.82
TDP1-217ENST00000557782 FLRT1Q9NZU1 646 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 ANKMY1Q9P2S6 941 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 SLC9A2Q9UBY0 812 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 KCNN3Q9UGI6 736 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 RNF150Q9ULK6 438 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 TCAF1Q9Y4C2 921 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 TMEM184BQ9Y519 407 aaPredicted RBP3.71□□□□□ -1.82
TDP1-217ENST00000557782 DUSP10Q9Y6W6 482 aa3.71□□□□□ -1.82
TDP1-217ENST00000557782 DHX29Q7Z478 1369 aaKnown RBP3.71□□□□□ -1.82
TDP1-217ENST00000557782 CCDC169A6NNP5 214 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 NPIPB6E9PJ23 425 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 J3QR06 171 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 AP3B1O00203 1094 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 HS3ST1O14792 307 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 TEX28O15482 410 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 XRCC3O43542 346 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 GMFGO60234 142 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 ZNF217O75362 1048 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 JTBO76095 146 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 FARP2O94887 1054 aaPredicted RBP3.7□□□□□ -1.82
TDP1-217ENST00000557782 ZNF202O95125 648 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 CLDN7O95471 211 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 ACSL3O95573 720 aa3.7□□□□□ -1.82
TDP1-217ENST00000557782 PTBP3O95758 552 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms