RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CCDC110Q8TBZ0 833 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 NAT14Q8WUY8 206 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 MAP3K3Q99759 626 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 TBL1YQ9BQ87 522 aa14.3□□□□□ -0.12
SHMT2-235ENST00000557740 GOLGA6L3A6NEY3 463 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 BTNL10A8MVZ5 291 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 EBLN1P0CF75 366 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 FOLR1P15328 257 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 F8A1P23610 371 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 HADHAP40939 763 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 ZNF75DP51815 510 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 ZNF140P52738 457 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-235ENST00000557740 TLE1Q04724 770 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 KCNAB1Q14722 419 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 ARHGEF18Q6ZSZ5 1173 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 OR13C4Q8NGS5 318 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 HM13Q8TCT9 377 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 HEXDCQ8WVB3 486 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 ALG3Q92685 438 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 MRFAP1L1Q96HT8 127 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 RMDN2Q96LZ7 410 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 INSM2Q96T92 566 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-235ENST00000557740 COPS8Q99627 209 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 KIR3DX1Q9H7L2 352 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 ZNF71Q9NQZ8 489 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-235ENST00000557740 HRASLS2Q9NWW9 162 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 SEMA5BQ9P283 1151 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 FEZ2Q9UHY8 353 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-235ENST00000557740 SLC24A2Q9UI40 661 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 PADI1Q9ULC6 663 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 POLHQ9Y253 713 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 HEBP2Q9Y5Z4 205 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 DUSP10Q9Y6W6 482 aa14.29□□□□□ -0.12
SHMT2-235ENST00000557740 OR6C74A6NCV1 312 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 GOLGA6L9A6NEM1 432 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 TIAF1O95411 115 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 POLBP06746 335 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 NDUFS1P28331 727 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 PRLHRP49683 370 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 HSD11B2P80365 405 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 TMPRSS15P98073 1019 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 XIAPP98170 497 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 DNASE1L3Q13609 305 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 ERV3-1Q14264 604 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 SPARCL1Q14515 664 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 SKIDA1Q1XH10 827 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 LACTB2Q53H82 288 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-235ENST00000557740 PWWP2BQ6NUJ5 590 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 SNX20Q7Z614 316 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 KIAA1328Q86T90 577 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 NXPE1Q8N323 547 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 SPDYE1Q8NFV5 336 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-235ENST00000557740 CT55Q8WUE5 264 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 ZFPM2Q8WW38 1151 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 ABHD17AQ96GS6 310 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 LINC00615Q96LM1 132 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-235ENST00000557740 FCRL4Q96PJ5 515 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 CCM2Q9BSQ5 444 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 TWSG1Q9GZX9 223 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 LHX9Q9NQ69 397 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 FGF21Q9NSA1 209 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 SOHLH2Q9NX45 425 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 ANAPC2Q9UJX6 822 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 COLEC10Q9Y6Z7 277 aa14.28□□□□□ -0.12
SHMT2-235ENST00000557740 HECTD1Q9ULT8 2610 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 PIPSLA2A3N6 862 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 CDC14CA4D256 554 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 C21orf140B9A014 251 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 ZBTB11O95625 1053 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-235ENST00000557740 ARCN1P48444 511 aaKnown RBP14.27□□□□□ -0.13
SHMT2-235ENST00000557740 VAV2P52735 878 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 TUBB4BP68371 445 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 PRKAA1Q13131 559 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 TUBB2AQ13885 445 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 TMTC4Q5T4D3 741 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 AADACL2Q6P093 401 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 CERS6Q6ZMG9 384 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 BPHLQ86WA6 291 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-235ENST00000557740 CFAP206Q8IYR0 622 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 CARFQ8N187 725 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 UBL4BQ8N7F7 174 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 LRRC57Q8N9N7 239 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 TTC13Q8NBP0 860 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 ACRBPQ8NEB7 543 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 C19orf43Q9BQ61 176 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 TUBB2BQ9BVA1 445 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 LACRTQ9GZZ8 138 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 EPN3Q9H201 632 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 FAM96AQ9H5X1 160 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 VPS37BQ9H9H4 285 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 AMFRQ9UKV5 643 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 REXO2Q9Y3B8 237 aaKnown RBP14.27□□□□□ -0.13
SHMT2-235ENST00000557740 PCDHGA6Q9Y5G7 932 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 KCNMB2Q9Y691 235 aa14.27□□□□□ -0.13
SHMT2-235ENST00000557740 ZNF106Q9H2Y7 1883 aaKnown RBP14.27□□□□□ -0.13
SHMT2-235ENST00000557740 GRID2IPA4D2P6 1211 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 MKRN2OSH3BPM6 223 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 MATN2O00339 956 aa14.26□□□□□ -0.13
SHMT2-235ENST00000557740 IFRD1O00458 451 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-235ENST00000557740 CCL22O00626 93 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms