RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 MPP5Q8N3R9 675 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 FBXO39Q8N4B4 442 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 KDF1Q8NAX2 398 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 BBOF1Q8ND07 529 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 OR2L2Q8NH16 312 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 WDR36Q8NI36 951 aaKnown RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 PATE1Q8WXA2 126 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CPT1BQ92523 772 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 NCSTNQ92542 709 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 LINC00615Q96LM1 132 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CNTNAP3BQ96NU0 1288 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CMKLR1Q99788 373 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 CNTNAP3Q9BZ76 1288 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 POLR1BQ9H9Y6 1135 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 THSD1Q9NS62 852 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 IMP3Q9NV31 184 aaKnown RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 SLC23A2Q9UGH3 650 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 PCYOX1Q9UHG3 505 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 TMPRSS11EQ9UL52 423 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 SOX13Q9UN79 622 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 PSMD13Q9UNM6 376 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 LAMA1P25391 3075 aa8.17□□□□□ -1.1
PSEN1-223ENST00000557511 TDRD6O60522 2096 aaKnown RBP8.17□□□□□ -1.1
PSEN1-223ENST00000557511 TRBV5-4A0A0C4DH59 114 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 LILRA5A6NI73 299 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 NTN3O00634 580 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 DNALI1O14645 258 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 PPM1DO15297 605 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 CD3EAPO15446 510 aaKnown RBP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 RRP8O43159 456 aaKnown RBP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 VAPBO95292 243 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 FOXN2P32314 431 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 CSTF2P33240 577 aaKnown RBP eCLIP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 ARSDP51689 593 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 CRADDP78560 199 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 B4GALNT1Q00973 533 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 ACVR1Q04771 509 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 CALCOCO2Q13137 446 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 RPA4Q13156 261 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 TRA2AQ13595 282 aaKnown RBP eCLIP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 NFE2L1Q14494 772 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 NR1D2Q14995 579 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 ST3GAL2Q16842 350 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 C3orf38Q5JPI3 329 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 TMEM164Q5U3C3 297 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 METRNLQ641Q3 311 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 ARMC6Q6NXE6 501 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 TMEM71Q6P5X7 295 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 PACS1Q6VY07 963 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 LRRC69Q6ZNQ3 347 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 TMEM26Q6ZUK4 368 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 USP53Q70EK8 1073 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 RAB11FIP2Q7L804 512 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 PRICKLE2Q7Z3G6 844 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 ZNF438Q7Z4V0 828 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 HOOK3Q86VS8 718 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 LRRC6Q86X45 466 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 PDIK1LQ8N165 341 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 OR13J1Q8NGT2 312 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 CALML6Q8TD86 181 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 ELMO1Q92556 727 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 GATA6Q92908 595 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 SLCO2A1Q92959 643 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 CCDC97Q96F63 343 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 ATXN7L3BQ96GX2 97 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 LIN37Q96GY3 246 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 SGSM3Q96HU1 749 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 C16orf45Q96MC5 204 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 C12orf66Q96MD2 445 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 PANX3Q96QZ0 392 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 KRT12Q99456 494 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 NAT9Q9BTE0 207 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 KIFC1Q9BW19 673 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 CCDC68Q9H2F9 335 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 UCK1Q9HA47 277 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 SYBUQ9NX95 663 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 SLC2A6Q9UGQ3 507 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 GNPTGQ9UJJ9 305 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 ATXN7L1Q9ULK2 861 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 PCYT1BQ9Y5K3 369 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-223ENST00000557511 ST14Q9Y5Y6 855 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 RPS6KL1Q9Y6S9 549 aa8.16□□□□□ -1.1
PSEN1-223ENST00000557511 IGLV3-16A0A075B6K0 115 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 IGHV1OR21-1A0A087WYE8 117 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 FAM237BA0A1B0GVD1 139 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 A0A1W2PQM1 296 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 TCRBV7S3A2A0A539 114 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 UBA6A0AVT1 1052 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 A6NCN8 305 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 OR51F1A6NGY5 319 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 OR52A4PA6NMU1 304 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 EFCAB8A8MWE9 144 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 H3BMM5 538 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 PRMT5O14744 637 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 LIN7AO14910 233 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 KPNA5O15131 536 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 B4GAT1O43505 415 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 URI1O94763 535 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 UBXN7O94888 489 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms