RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PADI1Q9ULC6 663 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 CNOT6Q9ULM6 557 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 SRPK3Q9UPE1 567 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 PPIL1Q9Y3C6 166 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 PCDHGA9Q9Y5G4 932 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 SLC30A1Q9Y6M5 507 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 CELSR1Q9NYQ6 3014 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 A0A0J9YYE9 177 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 WIPF3A6NGB9 483 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 ARGFXA6NJG6 315 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 C21orf140B9A014 251 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 TOX3O15405 576 aaPredicted RBP5.75□□□□□ -1.49
VPS33B-207ENST00000557470 SUSD5O60279 629 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 MAFKO60675 156 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 SPAG6O75602 509 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 RASSF9O75901 435 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 UBXN7O94888 489 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 TIAF1O95411 115 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 LDLRP01130 860 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 TRBC1P01850 177 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 PYGLP06737 847 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 FGF5P12034 268 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 SLC2A4P14672 509 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF30P17039 623 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 DESP17661 470 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 POU3F2P20265 443 aaPredicted RBP5.75□□□□□ -1.49
VPS33B-207ENST00000557470 CCND1P24385 295 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 PSMA2P25787 234 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 MMP13P45452 471 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 CCL11P51671 97 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 STC1P52823 247 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 RPS18P62269 152 aaKnown RBP5.75□□□□□ -1.49
VPS33B-207ENST00000557470 MAMLD1Q13495 774 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 LAMB3Q13751 1172 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 IHHQ14623 411 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 SLC9A5Q14940 896 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 UGT8Q16880 541 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 DPCR1Q3MIW9 517 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 TCP11X2Q5H9J9 407 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 FAM209AQ5JX71 171 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 C1QL3Q5VWW1 255 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 PAPD7Q5XG87 772 aaKnown RBP5.75□□□□□ -1.49
VPS33B-207ENST00000557470 JMJD6Q6NYC1 403 aaPredicted RBP5.75□□□□□ -1.49
VPS33B-207ENST00000557470 TMEM26Q6ZUK4 368 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 PRSS42Q7Z5A4 293 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 PHYKPLQ8IUZ5 450 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 SRRM1Q8IYB3 904 aaKnown RBP5.75□□□□□ -1.49
VPS33B-207ENST00000557470 MCOLN2Q8IZK6 566 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 Q8NA96 180 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 AVL9Q8NBF6 648 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 RSC1A1Q92681 617 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 PLEKHG4BQ96PX9 1271 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 WDR24Q96S15 920 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 TTC1Q99614 292 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 ING2Q9H160 280 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 UCK1Q9HA47 277 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 LIN7BQ9HAP6 207 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 LATS2Q9NRM7 1088 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 SAMSN1Q9NSI8 373 aaKnown RBP5.75□□□□□ -1.49
VPS33B-207ENST00000557470 ETNK2Q9NVF9 386 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 CWC15Q9P013 229 aaKnown RBP5.75□□□□□ -1.49
VPS33B-207ENST00000557470 ADGRG4Q8IZF6 3080 aa5.75□□□□□ -1.49
VPS33B-207ENST00000557470 SETD2Q9BYW2 2564 aaPredicted RBP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 PDZD2O15018 2839 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 OR5K4A6NMS3 321 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 FADS2P1A8MWK0 482 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 GRID2O43424 1007 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 KRT86O43790 486 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 PRPSAP2O60256 369 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 NUAK1O60285 661 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 LRCH4O75427 683 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 KRT38O76015 456 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 SNUPNO95149 360 aaKnown RBP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 CLDN7O95471 211 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 MT-ND3P03897 115 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 FOLR1P15328 257 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF8P17098 575 aaPredicted RBP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 AMD1P17707 334 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 NELFEP18615 380 aaKnown RBP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 XRCC1P18887 633 aaPredicted RBP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 ELAVL4P26378 380 aaKnown RBP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 EEF1GP26641 437 aaKnown RBP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 PTPN4P29074 926 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 MIPP30301 263 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 GATA4P43694 442 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 CAPZBP47756 277 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 CCT5P48643 541 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 HCAR3P49019 387 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 PPP1CAP62136 330 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 TUBB3Q13509 450 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 GTF2H3Q13889 308 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 KCNAB1Q14722 419 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 TOMM20Q15388 145 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 SYCP1Q15431 976 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 CHRNA6Q15825 494 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 SEPT7Q16181 437 aaKnown RBP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 LONRF1Q17RB8 773 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 RALGPS1Q5JS13 557 aa5.74□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF648Q5T619 568 aaPredicted RBP5.74□□□□□ -1.49
VPS33B-207ENST00000557470 HENMT1Q5T8I9 393 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms