RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 C3orf38Q5JPI3 329 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 PHF19Q5T6S3 580 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 RNF187Q5TA31 235 aaPredicted RBP10.45□□□□□ -0.74
LINC00239-201ENST00000556973 HIBCHQ6NVY1 386 aaPredicted RBP10.45□□□□□ -0.74
LINC00239-201ENST00000556973 RAB11FIP2Q7L804 512 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 TMPRSS9Q7Z410 1059 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 LDB1Q86U70 411 aaPredicted RBP10.45□□□□□ -0.74
LINC00239-201ENST00000556973 PLXDC1Q8IUK5 500 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 LMNTD2Q8IXW0 634 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 AGGF1Q8N302 714 aaeCLIP10.45□□□□□ -0.74
LINC00239-201ENST00000556973 FBXO39Q8N4B4 442 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 LILRA3Q8N6C8 439 aaPredicted RBP10.45□□□□□ -0.74
LINC00239-201ENST00000556973 BBOF1Q8ND07 529 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 ZCCHC14Q8WYQ9 949 aaKnown RBP10.45□□□□□ -0.74
LINC00239-201ENST00000556973 ELMO1Q92556 727 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 STAMBPL1Q96FJ0 436 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 SNF8Q96H20 258 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 C12orf66Q96MD2 445 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 SLC46A1Q96NT5 459 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 CMKLR1Q99788 373 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 NUDT22Q9BRQ3 303 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 CARD6Q9BX69 1037 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 EPB41L5Q9HCM4 733 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 IMP3Q9NV31 184 aaKnown RBP10.45□□□□□ -0.74
LINC00239-201ENST00000556973 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.45□□□□□ -0.74
LINC00239-201ENST00000556973 AKAP7Q9P0M2 348 aaPredicted RBP10.45□□□□□ -0.74
LINC00239-201ENST00000556973 MARCH4Q9P2E8 410 aaPredicted RBP10.45□□□□□ -0.74
LINC00239-201ENST00000556973 PDP2Q9P2J9 529 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 FAM8A1Q9UBU6 413 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 CDC23Q9UJX2 597 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 FAM169AQ9Y6X4 670 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 WDFY3Q8IZQ1 3526 aa10.45□□□□□ -0.74
LINC00239-201ENST00000556973 PRAMEF33A0A0G2JMD5 474 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 ZCWPW2A0A1B0GU75 182 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 GOLGA8KD6RF30 607 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 GOLGA8TH3BQL2 631 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 KIF2AO00139 706 aaPredicted RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 IFRD1O00458 451 aaPredicted RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 PLD2O14939 933 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 HGSO14964 777 aaPredicted RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 KPNA5O15131 536 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 BRINP1O60477 761 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 URI1O94763 535 aaPredicted RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 TTC4O95801 387 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 TYRP1P17643 537 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 OGNP20774 298 aaKnown RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 RBMS1P29558 406 aaKnown RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 PDHA2P29803 388 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 CCR7P32248 378 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 MLLT3P42568 568 aaPredicted RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 MAPK9P45984 424 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 ITGA8P53708 1063 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 ADARP55265 1226 aaKnown RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 ERVPABLB-1P60509 514 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 CKAP4Q07065 602 aaKnown RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 DHX9Q08211 1270 aaKnown RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 THOC5Q13769 683 aaKnown RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 TUBB2AQ13885 445 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 LONRF1Q17RB8 773 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 TYSND1Q2T9J0 566 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 PTRHD1Q6GMV3 140 aaKnown RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 NEPROQ6NW34 567 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 KLHL35Q6PF15 583 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 ZNF572Q7Z3I7 529 aaPredicted RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 PROSER1Q86XN7 944 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 PDIK1LQ8N165 341 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 OTUD6BQ8N6M0 293 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 SPDYE1Q8NFV5 336 aaPredicted RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 CALML6Q8TD86 181 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 ASZ1Q8WWH4 475 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 ZNF669Q96BR6 464 aaPredicted RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 LRRC39Q96DD0 335 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 PRR11Q96HE9 360 aaPredicted RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 ZNF578Q96N58 590 aaPredicted RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 PANX3Q96QZ0 392 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 FERD3LQ96RJ6 166 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 EBNA1BP2Q99848 306 aaKnown RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 TRIM56Q9BRZ2 755 aaKnown RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 ERP44Q9BS26 406 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 TRIM51Q9BSJ1 452 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 TUBB2BQ9BVA1 445 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 RAB33BQ9H082 229 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 P2RY12Q9H244 342 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 OR52A5Q9H2C5 316 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 INTS10Q9NVR2 710 aaKnown RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 GNPTGQ9UJJ9 305 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 ZMIZ1Q9ULJ6 1067 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 VPS9D1Q9Y2B5 631 aa10.44□□□□□ -0.74
LINC00239-201ENST00000556973 CFAP20Q9Y6A4 193 aaKnown RBP10.44□□□□□ -0.74
LINC00239-201ENST00000556973 ASPMQ8IZT6 3477 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 SPTBN2O15020 2390 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 A0A1W2PNU3 283 aaPredicted RBP10.43□□□□□ -0.74
LINC00239-201ENST00000556973 UBA6A0AVT1 1052 aaPredicted RBP10.43□□□□□ -0.74
LINC00239-201ENST00000556973 SLC5A10A0PJK1 596 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 SEC31AO94979 1220 aaKnown RBP10.43□□□□□ -0.74
LINC00239-201ENST00000556973 S1PR4O95977 384 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 APOA4P06727 396 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 THRAP10827 490 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 PGAM1P18669 254 aa10.43□□□□□ -0.74
LINC00239-201ENST00000556973 RPS3P23396 243 aaKnown RBP eCLIP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms