RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 POLHQ9Y253 713 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 PCDHGA6Q9Y5G7 932 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 PCDHA13Q9Y5I0 950 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 DNMT3AQ9Y6K1 912 aaPredicted RBP12.97□□□□□ -0.33
TGFB3-204ENST00000556285 FER1L5A0AVI2 2057 aa12.97□□□□□ -0.33
TGFB3-204ENST00000556285 RCCD1A6NED2 376 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 MGAT4DA6NG13 374 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 HACD1B0YJ81 288 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 CCL22O00626 93 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 SRP72O76094 671 aaKnown RBP12.96□□□□□ -0.33
TGFB3-204ENST00000556285 POLBP06746 335 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 CCNYL3P0C7X3 344 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 RNF224P0DH78 156 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 MSH3P20585 1137 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 LPOP22079 712 aaPredicted RBP12.96□□□□□ -0.33
TGFB3-204ENST00000556285 PSMB4P28070 264 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 TNNT3P45378 269 aaPredicted RBP12.96□□□□□ -0.33
TGFB3-204ENST00000556285 KPNA2P52292 529 aaKnown RBP12.96□□□□□ -0.33
TGFB3-204ENST00000556285 GEMP55040 296 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 TMPRSS15P98073 1019 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 XIAPP98170 497 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 LAMB3Q13751 1172 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 SEPT6Q14141 434 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 TAF1AQ15573 450 aaPredicted RBP12.96□□□□□ -0.33
TGFB3-204ENST00000556285 DNTTIP2Q5QJE6 756 aaKnown RBP12.96□□□□□ -0.33
TGFB3-204ENST00000556285 PRAMEF17Q5VTA0 474 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 AADACL2Q6P093 401 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 RANBP10Q6VN20 620 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 SLC38A9Q8NBW4 561 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 OR13C4Q8NGS5 318 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 ZNF514Q96K75 400 aaPredicted RBP12.96□□□□□ -0.33
TGFB3-204ENST00000556285 RMDN2Q96LZ7 410 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 ASB8Q9H765 288 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.96□□□□□ -0.33
TGFB3-204ENST00000556285 SLC24A2Q9UI40 661 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 KCND3Q9UK17 655 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 TRHDEQ9UKU6 1024 aa12.96□□□□□ -0.33
TGFB3-204ENST00000556285 USP9YO00507 2555 aaPredicted RBP12.96□□□□□ -0.34
TGFB3-204ENST00000556285 UBA6A0AVT1 1052 aaPredicted RBP12.95□□□□□ -0.34
TGFB3-204ENST00000556285 BLACEA4D250 179 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 TLCD2A6NGC4 264 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 MKRN2OSH3BPM6 223 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 APOC4-APOC2K7ER74 178 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 LCA5LO95447 670 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 APOC2P02655 101 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 CDKN1CP49918 316 aaPredicted RBP12.95□□□□□ -0.34
TGFB3-204ENST00000556285 PMS2P54278 862 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 HSD11B2P80365 405 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 OTUD4Q01804 1114 aaKnown RBP12.95□□□□□ -0.34
TGFB3-204ENST00000556285 KLRB1Q12918 225 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 GPS2Q13227 327 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 IL10RAQ13651 578 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 SPARCL1Q14515 664 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 LONRF2Q1L5Z9 754 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 FAM69BQ5VUD6 431 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 CPZQ66K79 652 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 DENND5AQ6IQ26 1287 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 LCN10Q6JVE6 187 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 C11orf63Q6NUN7 778 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 TCTN3Q6NUS6 607 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 ASB18Q6ZVZ8 466 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 D2HGDHQ8N465 521 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 OR2L2Q8NH16 312 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 ACTL9Q8TC94 416 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 RBM41Q96IZ5 413 aaKnown RBP12.95□□□□□ -0.34
TGFB3-204ENST00000556285 PSMG3-AS1Q96PY0 264 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 KIR3DX1Q9H7L2 352 aa12.95□□□□□ -0.34
TGFB3-204ENST00000556285 RFPL1O75677 317 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 ANXA9O76027 345 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 MT-ND3P03897 115 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 PRSS56P0CW18 603 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 POLR2CP19387 275 aaPredicted RBP12.94□□□□□ -0.34
TGFB3-204ENST00000556285 ARL4DP49703 201 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 ACY1Q03154 408 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 CHAF1BQ13112 559 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 BCL7AQ4VC05 210 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 ANKRD20A2Q5SQ80 823 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 ANKRD20A1Q5TYW2 823 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 ANKRD20A3Q5VUR7 823 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 CAPRIN2Q6IMN6 1127 aaKnown RBP12.94□□□□□ -0.34
TGFB3-204ENST00000556285 KLHL35Q6PF15 583 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 OOSP2Q86WS3 158 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 KMT5CQ86Y97 462 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 CFAP206Q8IYR0 622 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 OR4E2Q8NGC2 313 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 CCDC110Q8TBZ0 833 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 ZNF501Q96CX3 271 aaPredicted RBP12.94□□□□□ -0.34
TGFB3-204ENST00000556285 FCRL4Q96PJ5 515 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 ANP32EQ9BTT0 268 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 ACSL5Q9ULC5 683 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 DUSP10Q9Y6W6 482 aa12.94□□□□□ -0.34
TGFB3-204ENST00000556285 MACROD2A1Z1Q3 448 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 C5orf60A6NFR6 353 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 SLC9B1P1A6NJY1 282 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 C2orf81A6NN90 581 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 AGAP14A8MT82 685 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 C21orf140B9A014 251 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 KCNN4O15554 427 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 SCRG1O75711 98 aa12.93□□□□□ -0.34
TGFB3-204ENST00000556285 SLC35G4P0C7Q5 338 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms