RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 FASTKD1Q53R41 847 aaKnown RBP2.5□□□□□ -2.01
SRP54-207ENST00000555535 KHDRBS2Q5VWX1 349 aaKnown RBP2.5□□□□□ -2.01
SRP54-207ENST00000555535 IL27RAQ6UWB1 636 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 SEPT14Q6ZU15 432 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 ZNF534Q76KX8 674 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 FASTKD5Q7L8L6 764 aaKnown RBP2.5□□□□□ -2.01
SRP54-207ENST00000555535 Q8N377 158 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 HPSE2Q8WWQ2 592 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 TRIM63Q969Q1 353 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 RPS6KC1Q96S38 1066 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 RANBP17Q9H2T7 1088 aaKnown RBP2.5□□□□□ -2.01
SRP54-207ENST00000555535 EPB41L5Q9HCM4 733 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 GPR83Q9NYM4 423 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 CWC15Q9P013 229 aaKnown RBP2.5□□□□□ -2.01
SRP54-207ENST00000555535 LRWD1Q9UFC0 647 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.5□□□□□ -2.01
SRP54-207ENST00000555535 TSPYL4Q9UJ04 414 aa2.5□□□□□ -2.01
SRP54-207ENST00000555535 TMEM189-UBE2V1I3L0A0 370 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 HOXC11O43248 304 aaPredicted RBP2.49□□□□□ -2.01
SRP54-207ENST00000555535 ZBTB43O43298 467 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 CDC123O75794 336 aaPredicted RBP2.49□□□□□ -2.01
SRP54-207ENST00000555535 ZSCAN5DPP0CG00 497 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 CAPN2P17655 700 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 HARS2P49590 506 aaKnown RBP2.49□□□□□ -2.01
SRP54-207ENST00000555535 TMEM115Q12893 351 aaPredicted RBP2.49□□□□□ -2.01
SRP54-207ENST00000555535 UBE2V1Q13404 147 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 RRS1Q15050 365 aaKnown RBP2.49□□□□□ -2.01
SRP54-207ENST00000555535 TEAD2Q15562 447 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 SOWAHCQ53LP3 525 aaPredicted RBP2.49□□□□□ -2.01
SRP54-207ENST00000555535 PSRC1Q6PGN9 363 aaPredicted RBP2.49□□□□□ -2.01
SRP54-207ENST00000555535 INO80CQ6PI98 192 aaPredicted RBP2.49□□□□□ -2.01
SRP54-207ENST00000555535 GPRIN3Q6ZVF9 776 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 CCDC190Q86UF4 302 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 GPALPP1Q8IXQ4 340 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 DNAJC22Q8N4W6 341 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 L3MBTL4Q8NA19 623 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 OR8K5Q8NH50 307 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 ST8SIA4Q92187 359 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 RFT1Q96AA3 541 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 GCC1Q96CN9 775 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 SEPT5Q99719 369 aaPredicted RBP2.49□□□□□ -2.01
SRP54-207ENST00000555535 EPHA6Q9UF33 1036 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 LIMA1Q9UHB6 759 aaKnown RBP2.49□□□□□ -2.01
SRP54-207ENST00000555535 FBXW11Q9UKB1 542 aa2.49□□□□□ -2.01
SRP54-207ENST00000555535 R3HDM2Q9Y2K5 976 aaKnown RBP2.49□□□□□ -2.01
SRP54-207ENST00000555535 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.48□□□□□ -2.01
SRP54-207ENST00000555535 EPM2AB3EWF7 344 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 H3BQ06 376 aaPredicted RBP2.48□□□□□ -2.01
SRP54-207ENST00000555535 MAP2K7O14733 419 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 KHDRBS3O75525 346 aaKnown RBP2.48□□□□□ -2.01
SRP54-207ENST00000555535 CLDN1O95832 211 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 ACP2P11117 423 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 HSD3B1P14060 373 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 HNF4AP41235 474 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 TUBP50607 506 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 LIMK2P53671 638 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 ZBED6P86452 979 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 CDR2Q01850 454 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 LGALS3BPQ08380 585 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 MVPQ14764 893 aaKnown RBP2.48□□□□□ -2.01
SRP54-207ENST00000555535 DCAF10Q5QP82 559 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 TSPAN33Q86UF1 283 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 RASL10AQ92737 203 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 INTS12Q96CB8 462 aaKnown RBP2.48□□□□□ -2.01
SRP54-207ENST00000555535 MAGED4Q96JG8 741 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 MAP7D2Q96T17 732 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 RTN4RQ9BZR6 473 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 POLR1BQ9H9Y6 1135 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 PPCSQ9HAB8 311 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 MIOSQ9NXC5 875 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 TRMT1Q9NXH9 659 aaKnown RBP2.48□□□□□ -2.01
SRP54-207ENST00000555535 COMMD10Q9Y6G5 202 aa2.48□□□□□ -2.01
SRP54-207ENST00000555535 TMEM129A0AVI4 362 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 NPIPB15A6NHN6 443 aaPredicted RBP2.47□□□□□ -2.01
SRP54-207ENST00000555535 MSGN1A6NI15 193 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 SMAD9O15198 467 aaKnown RBP2.47□□□□□ -2.01
SRP54-207ENST00000555535 SLC25A12O75746 678 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 UBL4AP11441 157 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 PBX3P40426 434 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 RARSP54136 660 aaKnown RBP2.47□□□□□ -2.01
SRP54-207ENST00000555535 OLR1P78380 273 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 GPR17Q13304 367 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 DRP2Q13474 957 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 BIRC2Q13490 618 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 NECTIN1Q15223 517 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 DPCR1Q3MIW9 517 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 C2CD6Q53TS8 623 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 NOL8Q76FK4 1167 aaKnown RBP2.47□□□□□ -2.01
SRP54-207ENST00000555535 TICAM1Q8IUC6 712 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 TMEM116Q8NCL8 245 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 KBTBD8Q8NFY9 601 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 OR4C3Q8NH37 302 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 GSDMBQ8TAX9 411 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 HSD17B8Q92506 261 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 PERPQ96FX8 193 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 WDFY2Q96P53 400 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 RPP25Q9BUL9 199 aaKnown RBP2.47□□□□□ -2.01
SRP54-207ENST00000555535 CLEC7AQ9BXN2 247 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 P2RY12Q9H244 342 aa2.47□□□□□ -2.01
SRP54-207ENST00000555535 SLA2Q9H6Q3 261 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms