RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PYGLP06737 847 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 NMBRP28336 390 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 HADHAP40939 763 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 HK3P52790 923 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 PRAMEP78395 509 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 PEX6Q13608 980 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 DEFB133Q30KQ1 61 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 KHDC1Q4VXA5 237 aaKnown RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CCDC157Q569K6 752 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 PCID2Q5JVF3 399 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 WLSQ5T9L3 541 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CRTC3Q6UUV7 619 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 PHYKPLQ8IUZ5 450 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 OXR1Q8N573 874 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 EID2Q8N6I1 236 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 STYXQ8WUJ0 223 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 BTN2A2Q8WVV5 523 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CDKN2AIPNLQ96HQ2 116 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 SIKE1Q9BRV8 207 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 REPIN1Q9BWE0 567 aaKnown RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 IL22Q9GZX6 179 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 ERVMER34-1Q9H9K5 563 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 NPHS2Q9NP85 383 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 NPDC1Q9NQX5 325 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 NLE1Q9NVX2 485 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 IL1RAPL1Q9NZN1 696 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 SIRPGQ9P1W8 387 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 FAM8A1Q9UBU6 413 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 ZFP69BQ9UJL9 534 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 APPL1Q9UKG1 709 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 TMPRSS11EQ9UL52 423 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 DOLKQ9UPQ8 538 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 BTBD3Q9Y2F9 522 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 PLEKHM1Q9Y4G2 1056 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 WDR91A4D1P6 747 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 TOR1BO14657 336 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 AQP9O43315 295 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 PIAS2O75928 621 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 GOT2P00505 430 aaKnown RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 FUCA1P04066 466 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CSF2P04141 144 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 POLBP06746 335 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 KRT16P08779 473 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 NEFHP12036 1026 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 MYF5P13349 255 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 EZRP15311 586 aaKnown RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 NME1P15531 152 aaKnown RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 ZNF8P17098 575 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 ITGALP20701 1170 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 DGKAP23743 735 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CCND1P24385 295 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 EPHA8P29322 1005 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 PBLDP30039 288 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 ARFIP2P53365 341 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 HNRNPKP61978 463 aaKnown RBP eCLIP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 XIAPP98170 497 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 LAMB3Q13751 1172 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 ITGA9Q13797 1035 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 KRT72Q14CN4 511 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 INSCQ1MX18 579 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 SPANXN3Q5MJ09 141 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 GPRC6AQ5T6X5 926 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 ZDHHC20Q5W0Z9 365 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CHST15Q7LFX5 561 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 TAF8Q7Z7C8 310 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CLNKQ7Z7G1 428 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 LDB1Q86U70 411 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 GALNT13Q8IUC8 556 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 ZNF548Q8NEK5 533 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 DEFB124Q8NES8 71 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 OR13J1Q8NGT2 312 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CFAP61Q8NHU2 1237 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CCL4L1Q8NHW4 92 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 NETO1Q8TDF5 533 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 RHBDD1Q8TEB9 315 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 ZNF669Q96BR6 464 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 MFSD3Q96ES6 412 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CCDC97Q96F63 343 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 COX14Q96I36 57 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 LRRC61Q9BV99 259 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 TMEM168Q9H0V1 697 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 CDH19Q9H159 772 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 GPR27Q9NS67 375 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 DNAAF2Q9NVR5 837 aaKnown RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 KCNK4Q9NYG8 393 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 ATXN10Q9UBB4 475 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 BAIAP2L1Q9UHR4 511 aa9.72□□□□□ -0.85
PSEN1-213ENST00000555386 PCYT1BQ9Y5K3 369 aaPredicted RBP9.72□□□□□ -0.85
PSEN1-213ENST00000555386 RP1P56715 2156 aa9.71□□□□□ -0.85
PSEN1-213ENST00000555386 ASXL3Q9C0F0 2248 aa9.71□□□□□ -0.85
PSEN1-213ENST00000555386 MAGEB16A2A368 324 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 DCDC2BA2VCK2 349 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 OR2AG2A6NM03 316 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 MAP3K7O43318 606 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 DFNA5O60443 496 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 GLRA3O75311 464 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 CDK14O94921 469 aa9.71□□□□□ -0.86
PSEN1-213ENST00000555386 F7P08709 466 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-213ENST00000555386 HOXC4P09017 264 aaPredicted RBP9.71□□□□□ -0.86
PSEN1-213ENST00000555386 ACP5P13686 325 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms